| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSFOG00015022042 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
7229 bases |
Strand |
Plus strand |
| Position |
9 : 7654421 - 7661649 |
RNA binding domain |
SMN |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSFOP00015064068 |
SMN |
PF06003 |
2.1e-38 |
1 |
| ENSSFOP00015064068 |
SMN |
PF06003 |
2.1e-38 |
2 |
| ENSSFOP00015034586 |
SMN |
PF06003 |
1.1e-28 |
1 |
| ENSSFOP00015034586 |
SMN |
PF06003 |
1.1e-28 |
2 |
| ENSSFOP00015034619 |
SMN |
PF06003 |
1.3e-28 |
1 |
| ENSSFOP00015034619 |
SMN |
PF06003 |
1.3e-28 |
2 |
| ENSSFOP00015051460 |
SMN |
PF06003 |
4.5e-20 |
1 |
| ENSSFOP00015051460 |
SMN |
PF06003 |
4.5e-20 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSFOT00015034967 |
2781 |
447aa |
ENSSFOP00015034586 |
| - |
ENSSFOT00015046886 |
2753 |
380aa |
ENSSFOP00015064068 |
| - |
ENSSFOT00015034999 |
2693 |
458aa |
ENSSFOP00015034619 |
| - |
ENSSFOT00015066383 |
660 |
219aa |
ENSSFOP00015051460 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSFOG00015022042 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 30.5677 | 21.3974 | clupea_harengus | ENSCHAP00000018947 | 51.8519 | 36.2963 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 34.0611 | 22.7074 | oncorhynchus_kisutch | ENSOKIP00005072247 | 40.7311 | 27.154 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 34.9345 | 22.2707 | oncorhynchus_mykiss | ENSOMYP00000000241 | 41.7755 | 26.6319 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.3144 | 22.4891 | salmo_trutta | ENSSTUP00000011665 | 38.8451 | 27.0341 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.0961 | 22.4891 | salmo_salar | ENSSSAP00000172009 | 38.5827 | 27.0341 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 29.9127 | 19.4323 | oreochromis_niloticus | ENSONIP00000045201 | 36.9272 | 23.9892 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 31.8777 | 19.869 | astatotilapia_calliptera | ENSACLP00000004189 | 41.4773 | 25.8523 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 27.7293 | 18.1223 | lates_calcarifer | ENSLCAP00010046179 | 47.2119 | 30.855 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 27.5109 | 17.9039 | chrysemys_picta_bellii | ENSCPBP00000016809 | 43.75 | 28.4722 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 16.5939 | 11.1354 | pelodiscus_sinensis | ENSPSIP00000013878 | 55.8824 | 37.5 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.3144 | 19.4323 | seriola_dumerili | ENSSDUP00000028953 | 41.9263 | 25.2125 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 17.4672 | 10.0437 | poecilia_formosa | ENSPFOP00000029554 | 35.0877 | 20.1754 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 30.5677 | 21.179 | hucho_hucho | ENSHHUP00000046936 | 36.5535 | 25.3264 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.5328 | 19.4323 | anabas_testudineus | ENSATEP00000007993 | 41.7367 | 24.93 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 34.0611 | 22.7074 | oncorhynchus_tshawytscha | ENSOTSP00005066249 | 40.7311 | 27.154 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.5328 | 19.869 | amphiprion_ocellaris | ENSAOCP00000002946 | 41.0468 | 25.0689 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 25.5459 | 17.0306 | denticeps_clupeoides | ENSDCDP00000061619 | 36.2229 | 24.1486 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 33.4061 | 19.869 | mastacembelus_armatus | ENSMAMP00000024078 | 43.9655 | 26.1494 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 28.3843 | 18.7773 | larimichthys_crocea | ENSLCRP00005042250 | 43.9189 | 29.0541 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 19.869 | 13.5371 | amphiprion_percula | ENSAPEP00000001161 | 52.6012 | 35.8382 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 37.3362 | 27.5109 | paramormyrops_kingsleyae | ENSPKIP00000017515 | 46.594 | 34.3324 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 29.0393 | 17.0306 | sander_lucioperca | ENSSLUP00000043363 | 27.3101 | 16.0164 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.3144 | 19.4323 | seriola_lalandi_dorsalis | ENSSLDP00000017613 | 40.6593 | 24.4506 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 32.0961 | 20.0873 | maylandia_zebra | ENSMZEP00005004029 | 41.7614 | 26.1364 |
| ENSSFOG00015022042 | scleropages_formosus | ENSSFOP00015034619 | 34.4978 | 22.9258 | myripristis_murdjan | ENSMMDP00005015136 | 39.899 | 26.5152 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
