Description

Ensembl ID ENSSFAG00005025433 Gene ID 115400227 Accession -
Symbol Alias - Full Name pre-mRNA processing factor 8
Status Confidence Length 14409 bases Strand Plus strand
Position 14 : 5747423 - 5761831 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSFAP00005053191 PROCT PF08084 9.4e-52 1
ENSSFAP00005053191 PRP8_domainIV PF12134 5.4e-129 2
ENSSFAP00005053191 PRO8NT PF08082 2.5e-86 3
ENSSFAP00005053191 U6-snRNA_bdg PF10596 5.9e-89 4
ENSSFAP00005053191 PROCN PF08083 2.1e-234 5
ENSSFAP00005053191 RRM_4 PF10598 1e-47 6
ENSSFAP00005053191 U5_2-snRNA_bdg PF10597 1.1e-72 7
ENSSFAP00005053193 PRO8NT PF08082 2.1e-86 1
ENSSFAP00005053193 U6-snRNA_bdg PF10596 3.7e-89 2
ENSSFAP00005053193 PROCN PF08083 1.2e-234 3
ENSSFAP00005053193 RRM_4 PF10598 7.9e-48 4
ENSSFAP00005053193 U5_2-snRNA_bdg PF10597 7.9e-73 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSFAT00005054864 7741 2338aa ENSSFAP00005053191
- ENSSFAT00005054866 5358 1687aa ENSSFAP00005053193

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005025433

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005025433

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression