RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSFAG00005024975	Gene ID	115382082	Accession	-
Symbol		Alias	-	Full Name	SWT1 RNA endoribonuclease homolog
Status	Confidence	Length	22108 bases	Strand	Plus strand
Position	23 : 12821392 - 12843499	RNA binding domain	PIN_4
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSFAP00005052081	PIN_4	PF13638	9.6e-29	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSFAT00005053736	3110	970aa	ENSSFAP00005052081

Gene Model

Click here to download ENSSFAG00005024975's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSFAG00005024975's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSFAG00005024975

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSFAG00005024975

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression