Description

Ensembl ID ENSSFAG00005020968 Gene ID 115381773 Accession -
Symbol Alias - Full Name FMR1 autosomal homolog 1
Status Confidence Length 16435 bases Strand Minus strand
Position 23 : 27598793 - 27615227 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSFAP00005042240 Agenet PF05641 1.4e-14 1
ENSSFAP00005042240 FXR_C1 PF16096 3.8e-35 2
ENSSFAP00005042240 KH_1 PF00013 7.6e-18 3
ENSSFAP00005042240 KH_1 PF00013 7.6e-18 4
ENSSFAP00005042240 KH_9 PF17904 1.4e-33 5
ENSSFAP00005042240 FXMRP1_C_core PF12235 5.9e-53 6
ENSSFAP00005042899 Agenet PF05641 5.4e-12 1
ENSSFAP00005042899 FXR_C1 PF16096 2.2e-29 2
ENSSFAP00005042899 KH_1 PF00013 3e-18 3
ENSSFAP00005042899 KH_1 PF00013 3e-18 4
ENSSFAP00005042899 KH_9 PF17904 1.2e-33 5
ENSSFAP00005042899 FXMRP1_C_core PF12235 7.6e-55 6
ENSSFAP00005043032 Agenet PF05641 9.1e-11 1
ENSSFAP00005043032 KH_1 PF00013 8.4e-17 2
ENSSFAP00005043032 KH_1 PF00013 8.4e-17 3
ENSSFAP00005043032 KH_9 PF17904 8.7e-34 4
ENSSFAP00005043032 FXMRP1_C_core PF12235 1.3e-30 5
ENSSFAP00005042848 Agenet PF05641 1.1e-10 1
ENSSFAP00005042848 FXR_C1 PF16096 3.4e-33 2
ENSSFAP00005042848 KH_1 PF00013 2.4e-18 3
ENSSFAP00005042848 KH_1 PF00013 2.4e-18 4
ENSSFAP00005042848 KH_9 PF17904 1e-33 5
ENSSFAP00005042848 FXMRP1_C_core PF12235 9.4e-29 6
ENSSFAP00005042737 Agenet PF05641 1.8e-10 1
ENSSFAP00005042737 FXR_C1 PF16096 1.4e-33 2
ENSSFAP00005042737 KH_1 PF00013 2.2e-18 3
ENSSFAP00005042737 KH_1 PF00013 2.2e-18 4
ENSSFAP00005042737 KH_9 PF17904 2.3e-21 5
ENSSFAP00005042737 FXMRP1_C_core PF12235 1e-41 6
ENSSFAP00005042842 Agenet PF05641 2.3e-10 1
ENSSFAP00005042842 FXR_C1 PF16096 1.4e-28 2
ENSSFAP00005042842 KH_1 PF00013 2.8e-18 3
ENSSFAP00005042842 KH_1 PF00013 2.8e-18 4
ENSSFAP00005042842 KH_9 PF17904 1.3e-33 5
ENSSFAP00005042842 FXMRP1_C_core PF12235 2.3e-33 6
ENSSFAP00005042842 FXMRP1_C_core PF12235 2.3e-33 7
ENSSFAP00005042896 Agenet PF05641 2.7e-10 1
ENSSFAP00005042896 FXR_C1 PF16096 3.2e-35 2
ENSSFAP00005042896 KH_1 PF00013 1.6e-17 3
ENSSFAP00005042896 KH_1 PF00013 1.6e-17 4
ENSSFAP00005042896 KH_9 PF17904 1.1e-33 5
ENSSFAP00005042896 FXMRP1_C_core PF12235 4.2e-24 6
ENSSFAP00005042741 Agenet PF05641 3e-10 1
ENSSFAP00005042741 FXR_C1 PF16096 1.6e-28 2
ENSSFAP00005042741 KH_1 PF00013 3.4e-18 3
ENSSFAP00005042741 KH_1 PF00013 3.4e-18 4
ENSSFAP00005042741 KH_9 PF17904 1.4e-33 5
ENSSFAP00005042741 FXMRP1_C_core PF12235 8.5e-55 6
ENSSFAP00005042313 Agenet PF05641 1.5e-08 1
ENSSFAP00005042313 FXR_C1 PF16096 1.2e-34 2
ENSSFAP00005042313 KH_1 PF00013 7.2e-18 3
ENSSFAP00005042313 KH_1 PF00013 7.2e-18 4
ENSSFAP00005042313 KH_9 PF17904 1.4e-33 5
ENSSFAP00005042313 FXMRP1_C_core PF12235 5.6e-53 6
ENSSFAP00005042236 FXR_C1 PF16096 1.3e-34 1
ENSSFAP00005042236 KH_1 PF00013 8.4e-18 2
ENSSFAP00005042236 KH_1 PF00013 8.4e-18 3
ENSSFAP00005042236 KH_9 PF17904 1.5e-33 4
ENSSFAP00005042236 FXMRP1_C_core PF12235 6.2e-53 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSFAT00005043770 4247 698aa ENSSFAP00005042236
- ENSSFAT00005043774 4169 672aa ENSSFAP00005042240
- ENSSFAT00005043847 4291 650aa ENSSFAP00005042313
- ENSSFAT00005044278 1599 532aa ENSSFAP00005042737
- ENSSFAT00005044282 1857 618aa ENSSFAP00005042741
- ENSSFAT00005044387 1734 577aa ENSSFAP00005042842
- ENSSFAT00005044393 1581 526aa ENSSFAP00005042848
- ENSSFAT00005044442 1644 547aa ENSSFAP00005042896
- ENSSFAT00005044445 1737 578aa ENSSFAP00005042899
- ENSSFAT00005044578 1497 498aa ENSSFAP00005043032

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005020968

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005020968

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression