Description

Ensembl ID ENSSFAG00005007185 Gene ID Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 13381 bases Strand Plus strand
Position 18 : 17757284 - 17770664 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSFAP00005016643 SH3_12 PF18129 3e-20 1
ENSSFAP00005016643 XRN_N PF03159 4.1e-63 2
ENSSFAP00005016643 XRN1_D1 PF18332 2.7e-27 3
ENSSFAP00005017287 SH3_12 PF18129 2.1e-08 1
ENSSFAP00005017287 XRN_N PF03159 4.1e-94 2
ENSSFAP00005017287 XRN1_D1 PF18332 6e-28 3
ENSSFAP00005017359 XRN_N PF03159 3.2e-94 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSFAT00005017295 4866 1621aa ENSSFAP00005016643
- ENSSFAT00005017957 3249 1082aa ENSSFAP00005017287
- ENSSFAT00005018029 2745 914aa ENSSFAP00005017359

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005007185

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005007185

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression