Description

Ensembl ID ENSSFAG00005003768 Gene ID 115395294 Accession -
Symbol Alias - Full Name SMG6 nonsense mediated mRNA decay factor
Status Confidence Length 12085 bases Strand Minus strand
Position 10 : 24035149 - 24047233 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSFAP00005006189 EST1 PF10374 3.8e-15 1
ENSSFAP00005006189 PIN_4 PF13638 2.6e-21 2
ENSSFAP00005006189 EST1_DNA_bind PF10373 4.2e-60 3
ENSSFAP00005006192 EST1 PF10374 4.3e-15 1
ENSSFAP00005006192 PIN_4 PF13638 8.7e-22 2
ENSSFAP00005006192 EST1_DNA_bind PF10373 2.8e-60 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSFAT00005006511 5372 1648aa ENSSFAP00005006189
- ENSSFAT00005006514 5087 1555aa ENSSFAP00005006192

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005003768

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSFAG00005003768

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression