RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSFAG00005002521	Gene ID	115385407	Accession	-
Symbol		Alias	-	Full Name	PDX1 C-terminal inhibiting factor 1
Status	Confidence	Length	43077 bases	Strand	Plus strand
Position	CABFVL010000156.1 : 271109 - 314185	RNA binding domain	PCIF1_WW
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSFAP00005003738	PCIF1_WW	PF12237	7.8e-74	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSFAT00005004006	4062	727aa	ENSSFAP00005003738

Gene Model

Click here to download ENSSFAG00005002521's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSFAG00005002521's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSFAG00005002521

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSFAG00005002521

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression