| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSDUG00000002460 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
4890 bases |
Strand |
Plus strand |
| Position |
BDQW01000111.1 : 435238 - 440127 |
RNA binding domain |
RVT_1 , zf-CCHC |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSDUP00000003231 |
RVT_1 |
PF00078 |
6.1e-26 |
1 |
| ENSSDUP00000003231 |
zf-CCHC |
PF00098 |
5.2e-06 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSDUT00000003305 |
4890 |
1243aa |
ENSSDUP00000003231 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000007690 | 37.8788 | 20.3463 | seriola_dumerili | ENSSDUP00000003231 | 14.0788 | 7.56235 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000008126 | 45.0581 | 26.1628 | seriola_dumerili | ENSSDUP00000003231 | 12.4698 | 7.24055 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000030496 | 43.0769 | 28.9744 | seriola_dumerili | ENSSDUP00000003231 | 13.5157 | 9.09091 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000016312 | 51.5069 | 34.2466 | seriola_dumerili | ENSSDUP00000003231 | 15.1247 | 10.0563 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000018795 | 47.9349 | 32.791 | seriola_dumerili | ENSSDUP00000003231 | 30.8125 | 21.078 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000004212 | 30.5732 | 19.6178 | seriola_dumerili | ENSSDUP00000003231 | 19.3081 | 12.3894 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000004113 | 39.3855 | 22.905 | seriola_dumerili | ENSSDUP00000003231 | 11.3435 | 6.59694 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000015084 | 50.7418 | 30.2671 | seriola_dumerili | ENSSDUP00000003231 | 13.757 | 8.20595 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 47.7072 | 42.7997 | oreochromis_niloticus | ENSONIP00000054775 | 89.039 | 79.8799 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 21.7216 | 14.3202 | haplochromis_burtoni | ENSHBUP00000012560 | 52.0231 | 34.2967 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 46.0981 | 30.008 | astatotilapia_calliptera | ENSACLP00000026535 | 38.0984 | 24.8005 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 50.4425 | 32.9847 | astatotilapia_calliptera | ENSACLP00000000672 | 39.7087 | 25.9658 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 41.6734 | 27.9163 | astatotilapia_calliptera | ENSACLP00000026711 | 54.9894 | 36.8365 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 50.4425 | 32.9043 | astatotilapia_calliptera | ENSACLP00000021860 | 39.7087 | 25.9025 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 50.4425 | 32.9043 | astatotilapia_calliptera | ENSACLP00000026189 | 39.7087 | 25.9025 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 56.2349 | 56.2349 | seriola_lalandi_dorsalis | ENSSLDP00000005494 | 72.9645 | 72.9645 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 36.6854 | 27.9163 | betta_splendens | ENSBSLP00000032114 | 64.4979 | 49.0806 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 64.1995 | 48.8335 | betta_splendens | ENSBSLP00000031046 | 53.9554 | 41.0412 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 29.2035 | 23.1698 | betta_splendens | ENSBSLP00000047246 | 72.4551 | 57.485 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 60.7401 | 46.5004 | betta_splendens | ENSBSLP00000014217 | 64.9742 | 49.7418 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 22.6066 | 13.9179 | maylandia_zebra | ENSMZEP00005017810 | 29.8301 | 18.3652 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 42.1561 | 37.4095 | oryzias_javanicus | ENSOJAP00000009220 | 90.8146 | 80.5893 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 34.5133 | 21.8021 | stegastes_partitus | ENSSPAP00000002237 | 34.5968 | 21.8548 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 27.4336 | 16.3315 | carassius_auratus | ENSCARP00000049102 | 31.8394 | 18.9542 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 49.8793 | 32.3411 | astyanax_mexicanus | ENSAMXP00000035847 | 38.8715 | 25.2038 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 9.49316 | 5.95334 | cyprinus_carpio_carpio | ENSCCRP00000137054 | 46.8254 | 29.3651 |
| ENSSDUG00000002460 | seriola_dumerili | ENSSDUP00000003231 | 7.9646 | 4.66613 | sinocyclocheilus_grahami | ENSSGRP00000035043 | 35.7401 | 20.9386 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
