Description

Ensembl ID ENSSDAG00000013897 Gene ID Accession -
Symbol Alias - Full Name interferon induced with helicase C domain 1
Status Confidence Length 58753 bases Strand Plus strand
Position KZ293987.1 : 5026500 - 5085252 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSDAP00000022502 ResIII PF04851 1.9e-20 1
ENSSDAP00000022502 DEAD PF00270 5.5e-18 2
ENSSDAP00000022502 RIG-I_C PF18119 7.6e-30 3
ENSSDAP00000022502 RIG-I_C-RD PF11648 3.1e-36 4
ENSSDAP00000022499 ResIII PF04851 1.9e-20 1
ENSSDAP00000022499 DEAD PF00270 6.5e-18 2
ENSSDAP00000022499 RIG-I_C PF18119 7.6e-30 3
ENSSDAP00000022499 RIG-I_C-RD PF11648 3.2e-35 4
ENSSDAP00000022492 ResIII PF04851 1.9e-20 1
ENSSDAP00000022492 DEAD PF00270 6e-18 2
ENSSDAP00000022492 RIG-I_C PF18119 1.7e-28 3
ENSSDAP00000022492 RIG-I_C-RD PF11648 4.6e-36 4
ENSSDAP00000022174 ResIII PF04851 2e-20 1
ENSSDAP00000022174 DEAD PF00270 6.1e-18 2
ENSSDAP00000022174 RIG-I_C PF18119 8.3e-30 3
ENSSDAP00000022174 RIG-I_C-RD PF11648 4e-35 4
ENSSDAP00000022228 ResIII PF04851 2e-20 1
ENSSDAP00000022228 DEAD PF00270 6.1e-18 2
ENSSDAP00000022228 RIG-I_C PF18119 8.2e-30 3
ENSSDAP00000022228 RIG-I_C-RD PF11648 4.3e-35 4
ENSSDAP00000022140 ResIII PF04851 2e-20 1
ENSSDAP00000022140 DEAD PF00270 6.1e-18 2
ENSSDAP00000022140 RIG-I_C PF18119 8.3e-30 3
ENSSDAP00000022140 RIG-I_C-RD PF11648 4.3e-35 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSDAT00000025292 3021 1006aa ENSSDAP00000022140
- ENSSDAT00000025331 3018 1005aa ENSSDAP00000022174
- ENSSDAT00000025399 3018 1005aa ENSSDAP00000022228
- ENSSDAT00000025705 2892 963aa ENSSDAP00000022492
- ENSSDAT00000025714 2871 956aa ENSSDAP00000022499
- ENSSDAT00000025717 2868 955aa ENSSDAP00000022502

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSDAG00000013897

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSDAG00000013897

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression