RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSCUG00000000595	Gene ID	104137949	Accession	-
Symbol		Alias	-	Full Name	DEAD-box helicase 17
Status	Confidence	Length	14599 bases	Strand	Minus strand
Position	KL205872.1 : 621211 - 635809	RNA binding domain	DEAD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSCUP00000000700	DEAD	PF00270	3.9e-50	1
ENSSCUP00000000698	DEAD	PF00270	1.1e-49	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSCUT00000000989	2893	640aa	ENSSCUP00000000698
-	ENSSCUT00000000991	1287	428aa	ENSSCUP00000000700

Gene Model

Click here to download ENSSCUG00000000595's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSCUG00000000595's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000015841	69.5584	62.6183	struthio_camelus_australis	ENSSCUP00000000698	68.9062	62.0312
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000006990	28.9246	17.3053	struthio_camelus_australis	ENSSCUP00000000698	36.5625	21.875
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000001340	46.4912	30.7018	struthio_camelus_australis	ENSSCUP00000000698	33.125	21.875
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000022677	43.7653	30.3178	struthio_camelus_australis	ENSSCUP00000000698	27.9688	19.375
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000005153	44.64	30.72	struthio_camelus_australis	ENSSCUP00000000698	43.5938	30
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000021761	52.9301	39.3195	struthio_camelus_australis	ENSSCUP00000000698	43.75	32.5
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000005102	34.4765	20.7581	struthio_camelus_australis	ENSSCUP00000000698	29.8438	17.9688
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000021842	27.2727	18.2775	struthio_camelus_australis	ENSSCUP00000000698	44.5312	29.8438
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000001245	37.5421	22.7273	struthio_camelus_australis	ENSSCUP00000000698	34.8438	21.0938
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000001230	34.9594	19.5122	struthio_camelus_australis	ENSSCUP00000000698	33.5938	18.75
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000017014	32.7195	20.6799	struthio_camelus_australis	ENSSCUP00000000698	36.0938	22.8125
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000016177	41.6129	26.2903	struthio_camelus_australis	ENSSCUP00000000698	40.3125	25.4688
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000013600	36.5474	22.084	struthio_camelus_australis	ENSSCUP00000000698	36.7188	22.1875
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000013847	39.6135	25.1208	struthio_camelus_australis	ENSSCUP00000000698	25.625	16.25
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000830	40.8451	29.2254	struthio_camelus_australis	ENSSCUP00000000698	36.25	25.9375
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000014144	42.6501	26.294	struthio_camelus_australis	ENSSCUP00000000698	32.1875	19.8438
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000012837	35.0935	24.7525	struthio_camelus_australis	ENSSCUP00000000698	49.8438	35.1562
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000007768	45.3441	27.7328	struthio_camelus_australis	ENSSCUP00000000698	35	21.4062
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000011432	31.1989	18.3924	struthio_camelus_australis	ENSSCUP00000000698	35.7812	21.0938
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000018531	39.6648	22.7188	struthio_camelus_australis	ENSSCUP00000000698	33.2812	19.0625
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000024928	46.8447	28.3981	struthio_camelus_australis	ENSSCUP00000000698	30.1562	18.2812
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000004390	32.46	19.6507	struthio_camelus_australis	ENSSCUP00000000698	34.8438	21.0938
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000003396	30.3311	17.8808	struthio_camelus_australis	ENSSCUP00000000698	35.7812	21.0938
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000023369	25.4524	16.1641	struthio_camelus_australis	ENSSCUP00000000698	32.9688	20.9375
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000007658	28.2248	17.3691	struthio_camelus_australis	ENSSCUP00000000698	34.5312	21.25
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000018766	46.2617	31.3084	struthio_camelus_australis	ENSSCUP00000000698	30.9375	20.9375
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000022548	44.47	26.2673	struthio_camelus_australis	ENSSCUP00000000698	30.1562	17.8125
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000016276	16.0355	8.38034	struthio_camelus_australis	ENSSCUP00000000698	31.0938	16.25
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000025803	33.3901	20.2726	struthio_camelus_australis	ENSSCUP00000000698	30.625	18.5938
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000010027	40.4	23.2	struthio_camelus_australis	ENSSCUP00000000698	15.7812	9.0625

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	91.7188	90.9375	geospiza_fortis	ENSGFOP00000016325	93.92	93.12
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	93.9062	91.7188	taeniopygia_guttata	ENSTGUP00000027891	62.6042	61.1458
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	67.3438	57.0312	eptatretus_burgeri	ENSEBUP00000018552	52.1792	44.1889
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	74.6875	67.1875	callorhinchus_milii	ENSCMIP00000023665	67.5141	60.7345
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	82.6562	77.3438	latimeria_chalumnae	ENSLACP00000007440	75.6795	70.8155
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	18.5938	17.6562	lepisosteus_oculatus	ENSLOCP00000014491	95.2	90.4
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	36.25	32.1875	carassius_auratus	ENSCARP00000093350	76.0656	67.541
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	47.8125	45.625	astyanax_mexicanus	ENSAMXP00000004594	95.9248	91.536
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.1875	70.9375	esox_lucius	ENSELUP00000045526	76.1171	69.9538
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.9688	70.625	esox_lucius	ENSELUP00000068922	76.5337	69.3252
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.25	69.2188	oncorhynchus_kisutch	ENSOKIP00005039623	76.131	69.1108
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.5	70.625	oncorhynchus_mykiss	ENSOMYP00000022861	74.6988	68.0723
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.7188	70	salmo_salar	ENSSSAP00000174515	72.9569	66.5676
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.9688	71.4062	salmo_salar	ENSSSAP00000084978	73.3824	67.2059
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.875	69.8438	salmo_trutta	ENSSTUP00000079398	77.9715	70.8399
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.2812	71.25	salmo_trutta	ENSSTUP00000071055	75.3383	68.5714
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	72.0312	64.5312	salmo_trutta	ENSSTUP00000089368	74.3548	66.6129
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	70.1562	64.6875	fundulus_heteroclitus	ENSFHEP00000014105	71.84	66.24
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.9688	70.4688	oryzias_latipes	ENSORLP00000030362	79.2064	71.5873
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.7188	69.5312	cyclopterus_lumpus	ENSCLMP00005047587	77.3228	70.0787
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.4062	68.9062	oreochromis_niloticus	ENSONIP00000036016	77.2512	69.6682
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.5	70.7812	sparus_aurata	ENSSAUP00010019369	77.5	70.7812
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.2188	72.8125	lates_calcarifer	ENSLCAP00010026168	78.7267	72.3602
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	88.75	85.7812	chrysemys_picta_bellii	ENSCPBP00000032808	86.3222	83.4347
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	60.7812	58.5938	crocodylus_porosus	ENSCPRP00005027447	94.4175	91.0194
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	88.75	84.5312	sphenodon_punctatus	ENSSPUP00000014437	87.2504	83.1029
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	87.9688	84.6875	laticauda_laticaudata	ENSLLTP00000021195	87.017	83.7713
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	88.125	84.8438	pseudonaja_textilis	ENSPTXP00000001539	87.1716	83.9258
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	74.375	71.4062	erinaceus_europaeus	ENSEEUP00000002273	65.6552	63.0345
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	72.1875	70.625	loxodonta_africana	ENSLAFP00000029459	85.3974	83.549
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	57.5	55.4688	sus_scrofa	ENSSSCP00000000108	82.6966	79.7753
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.5625	70.625	dicentrarchus_labrax	ENSDLAP00005040051	74.1301	68.3812
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.6875	72.1875	dicentrarchus_labrax	ENSDLAP00005032038	79.0698	71.6279
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	87.8125	84.8438	pelodiscus_sinensis	ENSPSIP00000004394	88.924	85.9177
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	89.0625	84.8438	anolis_carolinensis	ENSACAP00000026768	82.4891	78.5818
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	60	58.4375	ursus_maritimus	ENSUMAP00000019998	90.9953	88.6256
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.9688	70.4688	oryzias_melastigma	ENSOMEP00000025280	80.2251	72.508
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.5938	71.0938	takifugu_rubripes	ENSTRUP00000023367	79.3375	71.7666
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	75.625	68.75	takifugu_rubripes	ENSTRUP00000059289	73.4446	66.7678
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.3438	71.25	kryptolebias_marmoratus	ENSKMAP00000029187	74.8865	68.9864
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	87.9688	84.5312	naja_naja	ENSNNAP00000009689	87.017	83.6167
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	69.6875	66.7188	tupaia_belangeri	ENSTBEP00000010821	61.2637	58.6538
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	69.6875	66.25	seriola_dumerili	ENSSDUP00000022186	90.2834	85.83
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.6562	71.25	seriola_dumerili	ENSSDUP00000028294	76.3441	70.0461
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	59.5312	57.6562	sorex_araneus	ENSSARP00000004230	78.5567	76.0825
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	57.5	53.75	poecilia_formosa	ENSPFOP00000012000	88.2494	82.494
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.875	70.625	poecilia_latipinna	ENSPLAP00000022067	75.3446	69.219
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.0938	69.375	scophthalmus_maximus	ENSSMAP00000056474	73.565	67.0695
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	40.1562	36.875	cottoperca_gobio	ENSCGOP00000011380	85.0993	78.1457
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	75.625	69.5312	labrus_bergylta	ENSLBEP00000035510	75.0388	68.9922
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.375	72.6562	amphilophus_citrinellus	ENSACIP00000002131	80.7631	73.9269
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	59.8438	55.3125	amphilophus_citrinellus	ENSACIP00000009500	85.6823	79.1946
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.5625	69.6875	hucho_hucho	ENSHHUP00000063235	77.7778	70.7936
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.125	70.9375	hucho_hucho	ENSHHUP00000002151	77.3994	70.2786
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.5312	72.3438	anabas_testudineus	ENSATEP00000012588	79.7806	72.5705
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	87.9688	84.375	podarcis_muralis	ENSPMRP00000035120	87.017	83.4621
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.3438	70.4688	oncorhynchus_tshawytscha	ENSOTSP00005071128	77.5862	70.6897
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	46.875	43.4375	sinocyclocheilus_grahami	ENSSGRP00000046167	69.1244	64.0553
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.375	72.3438	acanthochromis_polyacanthus	ENSAPOP00000001479	78.2743	71.3405
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	87.8125	84.0625	salvator_merianae	ENSSMRP00000020109	86.8624	83.153
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	20.1562	18.9062	tetraodon_nigroviridis	ENSTNIP00000008327	96.9925	90.9774
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	72.0312	67.1875	tetraodon_nigroviridis	ENSTNIP00000009000	88.6538	82.6923
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.5312	72.5	amphiprion_ocellaris	ENSAOCP00000019673	78.5494	71.6049
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.125	71.0938	maylandia_zebra	ENSMZEP00005007551	80.2568	73.0337
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.5625	70.625	oryzias_javanicus	ENSOJAP00000026133	75.3846	69.5385
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.125	72.3438	scleropages_formosus	ENSSFOP00015020318	72.3589	67.0043
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	84.6875	81.25	chelonoidis_abingdonii	ENSCABP00000024269	83.9009	80.4954
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.4062	70.4688	oryzias_sinensis	ENSOSIP00000045503	73.8671	68.1269
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.2812	70.9375	oryzias_sinensis	ENSOSIP00000001705	79.3978	71.9493
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.5312	72.5	amphiprion_percula	ENSAPEP00000018018	78.3077	71.3846
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.0938	68.75	betta_splendens	ENSBSLP00000007016	74.4648	67.2783
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.0312	70.7812	betta_splendens	ENSBSLP00000033120	77.1518	70.892
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.2188	72.1875	mastacembelus_armatus	ENSMAMP00000011729	78.7267	71.7391
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.5312	71.7188	sander_lucioperca	ENSSLUP00000053056	77.8287	70.1835
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	75	67.5	sander_lucioperca	ENSSLUP00000058558	73.3945	66.055
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	77.5	70.625	denticeps_clupeoides	ENSDCDP00000042220	75.9571	69.219
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	88.75	85.625	gopherus_evgoodei	ENSGEVP00005001461	88.3359	85.2255
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.8438	72.1875	larimichthys_crocea	ENSLCRP00005017609	74.4898	67.3469
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	76.7188	70.625	seriola_lalandi_dorsalis	ENSSLDP00000010737	77.813	71.6323
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	79.375	72.6562	seriola_lalandi_dorsalis	ENSSLDP00000032468	78.6378	71.9814
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	80.1562	73.125	myripristis_murdjan	ENSMMDP00005018087	79.4118	72.4458
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	74.6875	67.8125	hippocampus_comes	ENSHCOP00000013901	74.6875	67.8125
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	78.5938	72.1875	hippocampus_comes	ENSHCOP00000020388	75.753	69.5783
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	88.75	85.625	terrapene_carolina_triunguis	ENSTMTP00000007582	88.1988	85.0932
ENSSCUG00000000595	struthio_camelus_australis	ENSSCUP00000000698	72.8125	69.5312	leptobrachium_leishanense	ENSLLEP00000042117	77.5374	74.0433

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression