Description

Ensembl ID ENSSARG00000013553 Gene ID Accession -
Symbol DDX50 Alias - Full Name DExD-box helicase 50
Status Confidence Length 62095 bases Strand Plus strand
Position GeneScaffold_5199 : 40523 - 102617 RNA binding domain ResIII , DEAD , GUCT
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSARP00000012243 ResIII PF04851 1.2e-10 1
ENSSARP00000012243 DEAD PF00270 2.8e-47 2
ENSSARP00000012243 GUCT PF08152 4.5e-22 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
DDX50-201 ENSSART00000013562 2205 734aa ENSSARP00000012243

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSARG00000013553sorex_araneusENSSARP0000000815339.285725.4464sorex_araneusENSSARP0000001224311.98917.76567
ENSSARG00000013553sorex_araneusENSSARP0000001281234.514919.7761sorex_araneusENSSARP0000001224325.204414.4414
ENSSARG00000013553sorex_araneusENSSARP0000000707018.425511.5578sorex_araneusENSSARP0000001224314.98649.40055
ENSSARG00000013553sorex_araneusENSSARP0000000423033.608221.2371sorex_araneusENSSARP0000001224322.207114.0327
ENSSARG00000013553sorex_araneusENSSARP0000000890823.901414.3623sorex_araneusENSSARP0000001224330.381518.2561
ENSSARG00000013553sorex_araneusENSSARP0000001269226.953119.401sorex_araneusENSSARP0000001224328.201620.2997
ENSSARG00000013553sorex_araneusENSSARP0000000034425.333317.6667sorex_araneusENSSARP0000001224320.708414.4414
ENSSARG00000013553sorex_araneusENSSARP0000000348031.842619.678sorex_araneusENSSARP0000001224324.250714.9864
ENSSARG00000013553sorex_araneusENSSARP0000001249534.328420.1493sorex_araneusENSSARP0000001224318.801111.0354
ENSSARG00000013553sorex_araneusENSSARP0000000329331.168819.1558sorex_araneusENSSARP0000001224326.15816.0763
ENSSARG00000013553sorex_araneusENSSARP0000000682741.137124.0803sorex_araneusENSSARP0000001224316.75759.80926
ENSSARG00000013553sorex_araneusENSSARP0000000376124.367814.9425sorex_araneusENSSARP0000001224328.882817.7112
ENSSARG00000013553sorex_araneusENSSARP0000000474941.967925.7028sorex_araneusENSSARP0000001224328.474117.4387
ENSSARG00000013553sorex_araneusENSSARP0000000465919.10911.3716sorex_araneusENSSARP0000001224322.207113.2153
ENSSARG00000013553sorex_araneusENSSARP0000000292136.231921.3251sorex_araneusENSSARP0000001224323.84214.0327
ENSSARG00000013553sorex_araneusENSSARP0000000093122.058811.7647sorex_araneusENSSARP000000122438.174394.35967
ENSSARG00000013553sorex_araneusENSSARP0000001050129.079518.41sorex_araneusENSSARP0000001224318.937311.9891
ENSSARG00000013553sorex_araneusENSSARP0000000474148.395728.3422sorex_araneusENSSARP0000001224324.659414.4414
ENSSARG00000013553sorex_araneusENSSARP0000001299623.529413.4191sorex_araneusENSSARP0000001224317.43879.9455
ENSSARG00000013553sorex_araneusENSSARP0000001218137.591223.9051sorex_araneusENSSARP0000001224328.065417.8474
ENSSARG00000013553sorex_araneusENSSARP0000000415126.128616.0055sorex_araneusENSSARP0000001224326.021815.9401
ENSSARG00000013553sorex_araneusENSSARP0000000488814.49417.83956sorex_araneusENSSARP0000001224321.662111.7166
ENSSARG00000013553sorex_araneusENSSARP0000001168340.049126.5356sorex_araneusENSSARP0000001224322.207114.7139
ENSSARG00000013553sorex_araneusENSSARP0000000385528.116317.4515sorex_araneusENSSARP0000001224327.656717.1662
ENSSARG00000013553sorex_araneusENSSARP0000000330439.222623.6749sorex_araneusENSSARP0000001224315.12269.12807
ENSSARG00000013553sorex_araneusENSSARP0000001001228.036318.8422sorex_araneusENSSARP0000001224333.651222.6158
ENSSARG00000013553sorex_araneusENSSARP0000001227018.260910.3106sorex_araneusENSSARP0000001224320.027211.3079
ENSSARG00000013553sorex_araneusENSSARP0000000797421.320515.1307sorex_araneusENSSARP0000001224321.117214.9864
ENSSARG00000013553sorex_araneusENSSARP0000000544345.566528.3251sorex_araneusENSSARP0000001224325.204415.6676
ENSSARG00000013553sorex_araneusENSSARP0000000082241.395326.0465sorex_araneusENSSARP0000001224312.12537.62943
ENSSARG00000013553sorex_araneusENSSARP0000000413222.888613.7087sorex_araneusENSSARP0000001224325.476815.2589

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSARG00000013553sorex_araneusENSSARP0000001224375.340667.8474sarcophilus_harrisiiENSSHAP0000000653874.528367.1159
ENSSARG00000013553sorex_araneusENSSARP0000001224373.705771.5259choloepus_hoffmanniENSCHOP0000000020281.845779.4251
ENSSARG00000013553sorex_araneusENSSARP0000001224375.613170.9809dasypus_novemcinctusENSDNOP0000000129985.913380.6502
ENSSARG00000013553sorex_araneusENSSARP0000001224373.024571.1172erinaceus_europaeusENSEEUP0000000530072.925271.0204
ENSSARG00000013553sorex_araneusENSSARP0000001224373.84270.5722echinops_telfairiENSETEP0000001142173.84270.5722
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.2888callithrix_jacchusENSCJAP0000003508683.582181.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224358.855655.4496cercocebus_atysENSCATP0000003244168.571464.6032
ENSSARG00000013553sorex_araneusENSSARP0000001224361.444157.6294cercocebus_atysENSCATP0000002318373.692869.1176
ENSSARG00000013553sorex_araneusENSSARP0000001224381.198979.4278cercocebus_atysENSCATP0000001715981.868180.0824
ENSSARG00000013553sorex_araneusENSSARP0000001224375.885675.0681macaca_fascicularisENSMFAP0000002509482.886981.994
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.2888macaca_mulattaENSMMUP0000000135083.582181.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224325.068123.7057macaca_nemestrinaENSMNEP0000002213458.412755.2381
ENSSARG00000013553sorex_araneusENSSARP0000001224377.520475.8856macaca_nemestrinaENSMNEP0000001516880.480978.7836
ENSSARG00000013553sorex_araneusENSSARP0000001224362.942858.9918macaca_nemestrinaENSMNEP0000004615172.985868.4044
ENSSARG00000013553sorex_araneusENSSARP0000001224360.21856.6758mandrillus_leucophaeusENSMLEP0000003578272.937368.6469
ENSSARG00000013553sorex_araneusENSSARP0000001224327.384226.2943mandrillus_leucophaeusENSMLEP0000003435458.260955.942
ENSSARG00000013553sorex_araneusENSSARP0000001224382.016380.3815mandrillus_leucophaeusENSMLEP0000002637282.578980.9328
ENSSARG00000013553sorex_araneusENSSARP0000001224326.975526.0218gorilla_gorillaENSGGOP0000002275162.264260.0629
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.2888gorilla_gorillaENSGGOP0000001896783.582181.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224332.016329.9728gorilla_gorillaENSGGOP0000003899364.738360.6061
ENSSARG00000013553sorex_araneusENSSARP0000001224326.430525.6131pan_paniscusENSPPAP0000000750961.198759.306
ENSSARG00000013553sorex_araneusENSSARP0000001224330.245228.4741pan_paniscusENSPPAP0000002136965.486761.6519
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.1526pan_paniscusENSPPAP0000003589583.582181.8182
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.2888pongo_abeliiENSPPYP0000000277583.582181.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.2888homo_sapiensENSP0000036268783.582181.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224384.468782.8338canis_lupus_familiarisENSCAFP0084500419183.897282.2733
ENSSARG00000013553sorex_araneusENSSARP0000001224326.566825.6131pan_troglodytesENSPTRP0000007054461.514259.306
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.1526pan_troglodytesENSPTRP0000005996083.582181.8182
ENSSARG00000013553sorex_araneusENSSARP0000001224325.204423.842pan_troglodytesENSPTRP0000008398359.677456.4516
ENSSARG00000013553sorex_araneusENSSARP0000001224369.754867.7112vulpes_vulpesENSVVUP0000002793585.049882.5581
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196282.4251ursus_americanusENSUAMP0000001462083.739881.9783
ENSSARG00000013553sorex_araneusENSSARP0000001224384.059982.1526ailuropoda_melanoleucaENSAMEP0000001901283.491281.5968
ENSSARG00000013553sorex_araneusENSSARP0000001224379.291576.9755mustela_putorius_furoENSMPUP0000000455489.814887.1914
ENSSARG00000013553sorex_araneusENSSARP0000001224384.604982.6975felis_catusENSFCAP0000002397184.032582.138
ENSSARG00000013553sorex_araneusENSSARP0000001224384.604982.6975panthera_leoENSPLOP0000002397284.032582.138
ENSSARG00000013553sorex_araneusENSSARP0000001224384.604982.6975panthera_pardusENSPPRP0000002550884.146382.2493
ENSSARG00000013553sorex_araneusENSSARP0000001224378.610476.9755tursiops_truncatusENSTTRP0000001177878.396776.7663
ENSSARG00000013553sorex_araneusENSSARP0000001224375.749373.842delphinapterus_leucasENSDLEP0000001200781.764779.7059
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923781.6076physeter_catodonENSPCTP0000500894183.468881.1653
ENSSARG00000013553sorex_araneusENSSARP0000001224384.059982.0163balaenoptera_musculusENSBMSP0001003094984.404982.3529
ENSSARG00000013553sorex_araneusENSSARP0000001224383.651281.3352loxodonta_africanaENSLAFP0000000519283.651281.3352
ENSSARG00000013553sorex_araneusENSSARP0000001224375.476874.7956equus_asinusENSEASP0000502287382.440581.6964
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787582.1526equus_caballusENSECAP0000002064489.389587.6453
ENSSARG00000013553sorex_araneusENSSARP0000001224376.15874.7956procavia_capensisENSPCAP0000000904891.190989.5595
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923781.7439camelus_dromedariusENSCDRP0000502572983.468881.3008
ENSSARG00000013553sorex_araneusENSSARP0000001224381.880179.564sus_scrofaENSSSCP0000001092483.125980.7746
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196281.4714bos_taurusENSBTAP0000002200283.853581.1398
ENSSARG00000013553sorex_araneusENSSARP0000001224384.059981.3352capra_hircusENSCHIP0000000040083.604380.8943
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923781.3352ovis_aries_rambouilletENSOARP0002001229083.582181.0041
ENSSARG00000013553sorex_araneusENSSARP0000001224382.425179.2915ochotona_princepsENSOPRP0000000149382.537579.3997
ENSSARG00000013553sorex_araneusENSSARP0000001224383.651281.6076urocitellus_parryiiENSUPAP0001001065883.197881.1653
ENSSARG00000013553sorex_araneusENSSARP0000001224382.561379.564oryctolagus_cuniculusENSOCUP0000001836882.44979.4558
ENSSARG00000013553sorex_araneusENSSARP0000001224383.651281.4714marmota_marmota_marmotaENSMMMP0000001040883.085380.9202
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787581.0627dipodomys_ordiiENSDORP0000000685483.446480.7327
ENSSARG00000013553sorex_araneusENSSARP0000001224383.51580.2452cricetulus_griseus_chok1gshdENSCGRP0000102134883.28880.0272
ENSSARG00000013553sorex_araneusENSSARP0000001224336.239835.1499mesocricetus_auratusENSMAUP0000000010978.931776.5579
ENSSARG00000013553sorex_araneusENSSARP0000001224336.239835.1499mesocricetus_auratusENSMAUP0000001125978.931776.5579
ENSSARG00000013553sorex_araneusENSSARP0000001224382.561379.564mus_caroliMGP_CAROLIEiJ_P002313482.561379.564
ENSSARG00000013553sorex_araneusENSSARP0000001224382.9780.2452mus_pahariMGP_PahariEiJ_P008630582.9780.2452
ENSSARG00000013553sorex_araneusENSSARP0000001224382.833880.109mus_musculusENSMUSP0000002027082.833880.109
ENSSARG00000013553sorex_araneusENSSARP0000001224382.833880.109mus_spretusMGP_SPRETEiJ_P002427982.833880.109
ENSSARG00000013553sorex_araneusENSSARP0000001224382.833879.7003rattus_norvegicusENSRNOP0000009750782.833879.7003
ENSSARG00000013553sorex_araneusENSSARP0000001224382.833880.109mus_spicilegusENSMSIP0000003656082.833880.109
ENSSARG00000013553sorex_araneusENSSARP0000001224383.651280.654octodon_degusENSODEP0000001976883.423980.4348
ENSSARG00000013553sorex_araneusENSSARP0000001224383.378781.3352cavia_porcellusENSCPOP0000000192983.265381.2245
ENSSARG00000013553sorex_araneusENSSARP0000001224382.697579.7003heterocephalus_glaber_femaleENSHGLP0000001879782.360979.3758
ENSSARG00000013553sorex_araneusENSSARP0000001224375.340668.6648monodelphis_domesticaENSMODP0000001345874.228267.651
ENSSARG00000013553sorex_araneusENSSARP0000001224375.204467.3025vombatus_ursinusENSVURP0001001987071.225863.7419
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196282.4251ursus_maritimusENSUMAP0000001027883.626581.8674
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196281.4714bos_grunniensENSBGRP0000001666383.853581.1398
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787581.4714vicugna_pacosENSVPAP0000000057983.446481.1398
ENSSARG00000013553sorex_araneusENSSARP0000001224376.975574.6594microcebus_murinusENSMICP0000001597382.723380.2343
ENSSARG00000013553sorex_araneusENSSARP0000001224375.885673.9782bos_indicus_hybridENSBIXP0000501485782.886980.8036
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923781.4714otolemur_garnettiiENSOGAP0000000164283.582181.1398
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787581.7439chinchilla_lanigeraENSCLAP0000001892083.559881.5217
ENSSARG00000013553sorex_araneusENSSARP0000001224360.626756.4033chinchilla_lanigeraENSCLAP0000000268674.043368.8852
ENSSARG00000013553sorex_araneusENSSARP0000001224332.697531.1989chinchilla_lanigeraENSCLAP0000000214064.6961.7251
ENSSARG00000013553sorex_araneusENSSARP0000001224327.24825.4768aotus_nancymaaeENSANAP0000002653165.573861.3115
ENSSARG00000013553sorex_araneusENSSARP0000001224369.073665.5313aotus_nancymaaeENSANAP0000000227773.478369.7101
ENSSARG00000013553sorex_araneusENSSARP0000001224375.749373.842tupaia_belangeriENSTBEP0000000095075.44173.5414
ENSSARG00000013553sorex_araneusENSSARP0000001224375.476867.4387phascolarctos_cinereusENSPCIP0000002111674.262766.3539
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787581.8801monodon_monocerosENSMMNP0001502442683.108181.2162
ENSSARG00000013553sorex_araneusENSSARP0000001224382.152679.8365ictidomys_tridecemlineatusENSSTOP0000002189282.264779.9454
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923781.4714sciurus_vulgarisENSSVLP0000500502983.468881.0298
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196281.4714bos_mutusENSBMUP0000003025183.853581.1398
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787581.7439moschus_moschiferusENSMMSP0000003117583.333381.3008
ENSSARG00000013553sorex_araneusENSSARP0000001224375.613174.3869pteropus_vampyrusENSPVAP0000000896875.407674.1848
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787581.8801catagonus_wagneriENSCWAP0000002880089.389587.3547
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196281.4714bison_bison_bisonENSBBBP0000002721883.853581.1398
ENSSARG00000013553sorex_araneusENSSARP0000001224374.523273.0245saimiri_boliviensis_boliviensisENSSBOP0000000283681.886280.2395
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787582.0163phocoena_sinusENSPSNP0000002586082.995981.2416
ENSSARG00000013553sorex_araneusENSSARP0000001224384.059981.8801prolemur_simusENSPSMP0000001331583.717881.5468
ENSSARG00000013553sorex_araneusENSSARP0000001224382.833880.7902myotis_lucifugusENSMLUP0000001604182.946880.9004
ENSSARG00000013553sorex_araneusENSSARP0000001224381.062776.9755peromyscus_maniculatus_bairdiiENSPEMP0000003314580.296976.2483
ENSSARG00000013553sorex_araneusENSSARP0000001224355.585851.3624rhinopithecus_roxellanaENSRROP0000000556967.886962.7288
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787582.2888rhinopithecus_roxellanaENSRROP0000001601083.446481.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224326.15824.3869rhinopithecus_roxellanaENSRROP0000001551660.188156.1129
ENSSARG00000013553sorex_araneusENSSARP0000001224384.604982.6975panthera_tigris_altaicaENSPTIP0000000659784.146382.2493
ENSSARG00000013553sorex_araneusENSSARP0000001224383.651281.0627nannospalax_galiliENSNGAP0000000363583.537480.9524
ENSSARG00000013553sorex_araneusENSSARP0000001224371.117267.7112cebus_imitatorENSCCAP0000002555478.85275.0755
ENSSARG00000013553sorex_araneusENSSARP0000001224382.425179.1553jaculus_jaculusENSJJAP0000002448382.201178.9402
ENSSARG00000013553sorex_araneusENSSARP0000001224365.531362.2616jaculus_jaculusENSJJAP0000001834278.211474.3089
ENSSARG00000013553sorex_araneusENSSARP0000001224356.539552.0436rhinopithecus_bietiENSRBIP0000002541365.87360.6349
ENSSARG00000013553sorex_araneusENSSARP0000001224357.765753.8147rhinopithecus_bietiENSRBIP0000003172669.055464.3322
ENSSARG00000013553sorex_araneusENSSARP0000001224357.084553.8147propithecus_coquereliENSPCOP0000000430070.420266.3866
ENSSARG00000013553sorex_araneusENSSARP0000001224383.242580.109microtus_ochrogasterENSMOCP0000000213182.791379.6748
ENSSARG00000013553sorex_araneusENSSARP0000001224384.196282.0163neovison_visonENSNVIP0000001592483.626581.4614
ENSSARG00000013553sorex_araneusENSSARP0000001224354.768450nomascus_leucogenysENSNLEP0000003092267.56361.6807
ENSSARG00000013553sorex_araneusENSSARP0000001224383.787582.2888nomascus_leucogenysENSNLEP0000001419183.446481.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224383.651281.6076carlito_syrichtaENSTSYP0000000384583.310781.2754
ENSSARG00000013553sorex_araneusENSSARP0000001224384.468782.8338canis_lupus_dingoENSCAFP0002003345783.897282.2733
ENSSARG00000013553sorex_araneusENSSARP0000001224383.923782.2888chlorocebus_sabaeusENSCSAP0000000393683.582181.9539
ENSSARG00000013553sorex_araneusENSSARP0000001224363.215350.1362oryzias_javanicusENSOJAP0000004438859.716947.3616

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression