Description

Ensembl ID ENSSARG00000012818 Gene ID Accession -
Symbol Alias - Full Name pre-mRNA processing factor 38B
Status Confidence Length 6979 bases Strand Minus strand
Position scaffold_254427 : 32608 - 39586 RNA binding domain PRP38
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSARP00000011572 PRP38 PF03371 8.7e-54 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSART00000012814 1650 549aa ENSSARP00000011572

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSARG00000012818

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSARG00000012818sorex_araneusENSSARP0000001157298.542897.0856vulpes_vulpesENSVVUP0000000073598.542897.0856
ENSSARG00000012818sorex_araneusENSSARP0000001157297.996495.9927equus_asinusENSEASP0000504320798.534896.5201
ENSSARG00000012818sorex_araneusENSSARP0000001157295.628492.714cricetulus_griseus_chok1gshdENSCGRP0000101938295.978193.053
ENSSARG00000012818sorex_araneusENSSARP0000001157295.810692.1676mesocricetus_auratusENSMAUP0000002138696.513892.844
ENSSARG00000012818sorex_araneusENSSARP0000001157296.174993.4426mus_caroliMGP_CAROLIEiJ_P006002497.237694.4751
ENSSARG00000012818sorex_araneusENSSARP0000001157296.174994.1712mus_pahariMGP_PahariEiJ_P007096697.058895.0368
ENSSARG00000012818sorex_araneusENSSARP0000001157296.174992.8962mus_musculusENSMUSP0000002948097.41794.0959
ENSSARG00000012818sorex_araneusENSSARP0000001157296.539293.4426mus_spretusMGP_SPRETEiJ_P006240397.426594.3015
ENSSARG00000012818sorex_araneusENSSARP0000001157228.233224.9545heterocephalus_glaber_femaleENSHGLP0000004385876.354767.4877
ENSSARG00000012818sorex_araneusENSSARP0000001157298.178596.357pteropus_vampyrusENSPVAP0000001124398.357796.5328
ENSSARG00000012818sorex_araneusENSSARP0000001157297.996495.9927saimiri_boliviensis_boliviensisENSSBOP0000003776698.534896.5201
ENSSARG00000012818sorex_araneusENSSARP0000001157281.785179.5993myotis_lucifugusENSMLUP0000001743095.127192.5847
ENSSARG00000012818sorex_araneusENSSARP0000001157287.978186.7031myotis_lucifugusENSMLUP0000000951196.98895.5823
ENSSARG00000012818sorex_araneusENSSARP0000001157295.628492.8962peromyscus_maniculatus_bairdiiENSPEMP0000002945095.978193.2358
ENSSARG00000012818sorex_araneusENSSARP0000001157297.814295.9927rhinolophus_ferrumequinumENSRFEP0001002652398.171896.3437
ENSSARG00000012818sorex_araneusENSSARP0000001157295.992794.1712nannospalax_galiliENSNGAP0000000852696.697394.8624
ENSSARG00000012818sorex_araneusENSSARP0000001157275.409872.3133jaculus_jaculusENSJJAP0000001177496.055792.1114

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression