Description

Ensembl ID ENSSANG00000042485 Gene ID 107680995 Accession -
Symbol Alias - Full Name ataxin-2-like
Status Confidence Length 22825 bases Strand Plus strand
Position LAVE01S001581.1 : 1611208 - 1634032 RNA binding domain LsmAD , PAM2 , SM-ATX
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSANP00000085843 LsmAD PF06741 7.3e-15 1
ENSSANP00000085843 PAM2 PF07145 2.8e-06 2
ENSSANP00000085843 SM-ATX PF14438 2.9e-18 3
ENSSANP00000085716 LsmAD PF06741 7.4e-15 1
ENSSANP00000085716 PAM2 PF07145 3e-06 2
ENSSANP00000085716 SM-ATX PF14438 2.5e-18 3
ENSSANP00000085857 LsmAD PF06741 7.4e-15 1
ENSSANP00000085857 PAM2 PF07145 2.8e-06 2
ENSSANP00000085857 SM-ATX PF14438 2.9e-18 3
ENSSANP00000085850 LsmAD PF06741 7.5e-15 1
ENSSANP00000085850 PAM2 PF07145 2.7e-06 2
ENSSANP00000085850 SM-ATX PF14438 7.6e-18 3
ENSSANP00000085872 LsmAD PF06741 7.5e-15 1
ENSSANP00000085872 PAM2 PF07145 3e-06 2
ENSSANP00000085872 SM-ATX PF14438 3.1e-18 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSANT00000091099 4301 1038aa ENSSANP00000085716
- ENSSANT00000091237 4626 1030aa ENSSANP00000085843
- ENSSANT00000091245 4469 1051aa ENSSANP00000085850
- ENSSANT00000091254 4256 1038aa ENSSANP00000085857
- ENSSANT00000091269 3171 1056aa ENSSANP00000085872

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSANG00000042485

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSANG00000042485

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression