RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSANG00000034509	Gene ID	107672022	Accession	-
Symbol		Alias	-	Full Name	C->U-editing enzyme APOBEC-2-like
Status	Confidence	Length	4226 bases	Strand	Minus strand
Position	LAVE01S019256.1 : 1227335 - 1231560	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSANP00000069203	APOBEC_N	PF08210	4.3e-45	1
ENSSANP00000069203	APOBEC_C	PF05240	1.3e-22	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSANT00000073571	2805	273aa	ENSSANP00000069203

Gene Model

Click here to download ENSSANG00000034509's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSANG00000034509's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSANG00000034509

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSANG00000034509

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression