RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSRNOG00000068319	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	854 bases	Strand	Minus strand
Position	14 : 23279901 - 23280754	RNA binding domain	Dus
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSRNOP00000082664	Dus	PF01207	1.6e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSRNOT00000097435	291	96aa	ENSRNOP00000082664

Gene Model

Click here to download ENSRNOG00000068319's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSRNOG00000068319's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRNOG00000068319

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRNOG00000068319	rattus_norvegicus	ENSRNOP00000082664	47.9167	40.625	meleagris_gallopavo	ENSMGAP00000032128	63.8889	54.1667
ENSRNOG00000068319	rattus_norvegicus	ENSRNOP00000082664	50	39.5833	naja_naja	ENSNNAP00000026990	46.6019	36.8932
ENSRNOG00000068319	rattus_norvegicus	ENSRNOP00000082664	48.9583	42.7083	naja_naja	ENSNNAP00000026965	55.9524	48.8095

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression