| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSRNOG00000024507 | Gene ID |
|
Accession |
- |
| Symbol |
RGD1309489 |
Alias |
- |
Full Name |
similar to Est1p-like protein B |
| Status |
Confidence |
Length |
135022 bases |
Strand |
Plus strand |
| Position |
7 : 75917392 - 76052413 |
RNA binding domain |
EST1 , EST1_DNA_bind |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSRNOP00000082139 |
EST1 |
PF10374 |
5.1e-16 |
1 |
| ENSRNOP00000082139 |
EST1_DNA_bind |
PF10373 |
1.8e-29 |
2 |
| ENSRNOP00000095623 |
EST1 |
PF10374 |
5.1e-16 |
1 |
| ENSRNOP00000095623 |
EST1_DNA_bind |
PF10373 |
1.8e-29 |
2 |
| ENSRNOP00000091020 |
EST1 |
PF10374 |
5.2e-16 |
1 |
| ENSRNOP00000091020 |
EST1_DNA_bind |
PF10373 |
1.8e-29 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Smg5l1-202 |
ENSRNOT00000095375 |
4488 |
973aa |
ENSRNOP00000082139 |
| Smg5l1-203 |
ENSRNOT00000101664 |
4315 |
973aa |
ENSRNOP00000095623 |
| Smg5l1-201 |
ENSRNOT00000037006 |
3564 |
987aa |
ENSRNOP00000091020 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000026514 | 57.4238 | 41.7896 | rattus_norvegicus | ENSRNOP00000091020 | 59.1692 | 43.0598 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000075794 | 26.2005 | 14.0691 | rattus_norvegicus | ENSRNOP00000091020 | 31.5096 | 16.92 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 90.0709 | 87.538 | mus_spicilegus | ENSMSIP00000014593 | 91.0861 | 88.5246 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 45.694 | 30.6991 | sarcophilus_harrisii | ENSSHAP00000011120 | 49.1821 | 33.0425 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 55.7244 | 47.2138 | dasypus_novemcinctus | ENSDNOP00000023566 | 65.5542 | 55.5423 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 73.2523 | 62.8166 | bos_taurus | ENSBTAP00000034394 | 72.7364 | 62.3742 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 42.1479 | 34.8531 | ovis_aries_rambouillet | ENSOARP00020016624 | 68.4211 | 56.5789 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 72.6444 | 62.1074 | capra_hircus | ENSCHIP00000002650 | 72.94 | 62.3601 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 43.0598 | 35.9676 | oryctolagus_cuniculus | ENSOCUP00000017862 | 63.7181 | 53.2234 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 74.3668 | 65.9574 | urocitellus_parryii | ENSUPAP00010017599 | 75.4368 | 66.9065 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 43.2624 | 37.8926 | marmota_marmota_marmota | ENSMMMP00000019450 | 77.6364 | 68 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 45.7953 | 42.2492 | cricetulus_griseus_chok1gshd | ENSCGRP00001000741 | 83.549 | 77.0795 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 46.9098 | 41.4387 | mesocricetus_auratus | ENSMAUP00000000019 | 82.8265 | 73.1664 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 75.3799 | 66.2614 | heterocephalus_glaber_female | ENSHGLP00000047215 | 72.444 | 63.6806 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 75.1773 | 67.1733 | sciurus_vulgaris | ENSSVLP00005001833 | 75.4832 | 67.4466 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 72.4417 | 62.31 | bos_grunniens | ENSBGRP00000007500 | 74.4792 | 64.0625 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 73.2523 | 62.8166 | bos_indicus_hybrid | ENSBIXP00005011009 | 73.5504 | 63.0722 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 42.6545 | 36.1702 | bos_mutus | ENSBMUP00000001257 | 72.4613 | 61.4458 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 82.2695 | 74.9747 | nannospalax_galili | ENSNGAP00000009407 | 82.6043 | 75.2798 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 73.3536 | 62.0061 | cervus_hanglu_yarkandensis | ENSCHYP00000018476 | 73.7271 | 62.3218 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 48.7335 | 44.4782 | microtus_ochrogaster | ENSMOCP00000008426 | 84.2382 | 76.8827 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 47.0111 | 43.769 | peromyscus_maniculatus_bairdii | ENSPEMP00000008341 | 83.6036 | 77.8378 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 71.0233 | 60.7903 | bison_bison_bison | ENSBBBP00000020508 | 74.2585 | 63.5593 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 37.7913 | 19.8582 | drosophila_melanogaster | FBpp0080139 | 31.6907 | 16.6525 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 41.3374 | 23.6069 | ciona_intestinalis | ENSCINP00000017766 | 42.7673 | 24.4235 |
| ENSRNOG00000024507 | rattus_norvegicus | ENSRNOP00000091020 | 13.1712 | 7.80142 | ciona_savignyi | ENSCSAVP00000009434 | 45.2962 | 26.8293 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
