RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSRFEG00010001731	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3793 bases	Strand	Minus strand
Position	10 : 8327763 - 8331555	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSRFEP00010002402	APOBEC_N	PF08210	2.7e-46	1
ENSRFEP00010002402	APOBEC_C	PF05240	1.2e-26	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSRFET00010002646	904	195aa	ENSRFEP00010002402

Gene Model

Click here to download ENSRFEG00010001731's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSRFEG00010001731's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010006631	47.9798	36.8687	rhinolophus_ferrumequinum	ENSRFEP00010002402	48.7179	37.4359
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002311	47.6636	29.4393	rhinolophus_ferrumequinum	ENSRFEP00010002402	52.3077	32.3077
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002335	43.2161	28.1407	rhinolophus_ferrumequinum	ENSRFEP00010002402	44.1026	28.7179
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010006586	32.2034	18.6441	rhinolophus_ferrumequinum	ENSRFEP00010002402	38.9744	22.5641
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002028	38.3929	23.6607	rhinolophus_ferrumequinum	ENSRFEP00010002402	44.1026	27.1795
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002639	61.0169	59.322	rhinolophus_ferrumequinum	ENSRFEP00010002402	92.3077	89.7436

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	37.9487	22.5641	sarcophilus_harrisii	ENSSHAP00000043123	25.6944	15.2778
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	47.1795	31.7949	dasypus_novemcinctus	ENSDNOP00000026198	41.4414	27.9279
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.0513	45.1282	callithrix_jacchus	ENSCJAP00000089833	23.3141	16.9557
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.1026	45.641	callithrix_jacchus	ENSCJAP00000084123	26.2055	18.6583
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	60	46.6667	callithrix_jacchus	ENSCJAP00000021265	62.234	48.4043
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	61.0256	45.1282	callithrix_jacchus	ENSCJAP00000022907	30.9896	22.9167
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	58.4615	44.1026	callithrix_jacchus	ENSCJAP00000041864	29.2308	22.0513
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	16.4103	8.71795	cercocebus_atys	ENSCATP00000009473	40.5063	21.519
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	48.7179	macaca_mulatta	ENSMMUP00000069989	24.6	19
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.5897	49.2308	macaca_nemestrina	ENSMNEP00000030872	28.7703	22.2738
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	61.0256	48.2051	papio_anubis	ENSPANP00000049773	22.243	17.5701
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.5897	48.7179	mandrillus_leucophaeus	ENSMLEP00000005602	31.1558	23.8693
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	57.4359	43.5897	gorilla_gorilla	ENSGGOP00000021965	29.7872	22.6064
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	17.9487	10.2564	pan_paniscus	ENSPPAP00000016850	34.6535	19.802
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	48.7179	pan_troglodytes	ENSPTRP00000024786	32.0312	24.7396
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.5641	46.6667	pongo_abelii	ENSPPYP00000013200	30.6533	22.8643
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	49.2308	homo_sapiens	ENSP00000385057	32.0312	25
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	48.2051	canis_lupus_familiaris	ENSCAFP00845030904	62.4365	47.7157
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	48.2051	canis_lupus_familiaris	ENSCAFP00845030967	62.4365	47.7157
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	36.9231	28.2051	vulpes_vulpes	ENSVVUP00000030952	32.8767	25.1142
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.1282	49.7436	ailuropoda_melanoleuca	ENSAMEP00000011361	64.1414	48.9899
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	60.5128	50.7692	mustela_putorius_furo	ENSMPUP00000013137	61.7801	51.8325
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	70.7692	56.9231	tursiops_truncatus	ENSTTRP00000008904	71.5026	57.513
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	72.8205	56.4103	delphinapterus_leucas	ENSDLEP00000014852	73.1959	56.701
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	71.7949	54.8718	physeter_catodon	ENSPCTP00005012316	60.8696	46.5217
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	71.2821	55.8974	balaenoptera_musculus	ENSBMSP00010013827	56.0484	43.9516
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	67.6923	57.4359	equus_asinus	ENSEASP00005045993	60.5505	51.3761
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	69.7436	57.9487	equus_asinus	ENSEASP00005044584	46.5753	38.6986
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	55.8974	47.6923	equus_asinus	ENSEASP00005053754	28.2383	24.0933
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	71.7949	59.4872	equus_asinus	ENSEASP00005039630	62.5	51.7857
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	70.7692	58.9744	equus_asinus	ENSEASP00005054220	65.0943	54.2453
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	58.4615	47.6923	loxodonta_africana	ENSLAFP00000007464	57	46.5
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.5641	46.6667	loxodonta_africana	ENSLAFP00000015727	31.1224	23.2143
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.6154	48.7179	loxodonta_africana	ENSLAFP00000004418	70	52.7778
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	66.6667	55.3846	equus_caballus	ENSECAP00000034229	43.0464	35.7616
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	61.5385	47.1795	procavia_capensis	ENSPCAP00000014573	26.1438	20.0436
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	47.6923	34.8718	procavia_capensis	ENSPCAP00000001724	67.8832	49.635
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.641	50.7692	capra_hircus	ENSCHIP00000010038	60.0939	46.4789
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	70.2564	58.9744	camelus_dromedarius	ENSCDRP00005019368	70.6186	59.2784
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	67.6923	51.7949	bos_taurus	ENSBTAP00000067633	65.0246	49.7537
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.641	49.2308	ovis_aries_rambouillet	ENSOARP00020014781	69.1892	51.8919
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	60	44.6154	oryctolagus_cuniculus	ENSOCUP00000017941	46.8	34.8
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	57.9487	43.5897	ochotona_princeps	ENSOPRP00000002145	62.4309	46.9613
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.641	50.7692	ursus_maritimus	ENSUMAP00000019753	64.6465	50
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.1282	50.7692	ursus_maritimus	ENSUMAP00000002553	61.9512	48.2927
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	37.4359	22.0513	vombatus_ursinus	ENSVURP00010031524	24.4966	14.4295
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	67.6923	52.3077	bos_grunniens	ENSBGRP00000004854	50.5747	39.0805
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	68.2051	52.3077	bos_indicus_hybrid	ENSBIXP00005043893	71.8919	55.1351
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	38.9744	23.0769	monodelphis_domestica	ENSMODP00000040505	29.2308	17.3077
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.5641	49.7436	microcebus_murinus	ENSMICP00000046037	60.396	48.0198
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	59.4872	45.641	microcebus_murinus	ENSMICP00000045904	61.7021	47.3404
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.5641	46.6667	aotus_nancymaae	ENSANAP00000026972	31.9372	23.822
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	49.7436	aotus_nancymaae	ENSANAP00000004950	55.4054	43.6937
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	55.8974	41.5385	aotus_nancymaae	ENSANAP00000020356	31.5942	23.4783
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	56.9231	41.5385	aotus_nancymaae	ENSANAP00000021241	29.8387	21.7742
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.641	52.3077	otolemur_garnettii	ENSOGAP00000019782	33.5079	26.7016
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	47.1795	otolemur_garnettii	ENSOGAP00000017529	60.2941	45.098
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	38.9744	23.5897	phascolarctos_cinereus	ENSPCIP00000049844	29.2308	17.6923
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	72.3077	56.9231	monodon_monoceros	ENSMMNP00015027473	72.6804	57.2165
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	70.2564	55.3846	phocoena_sinus	ENSPSNP00000013272	70.6186	55.6701
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.1282	51.7949	saimiri_boliviensis_boliviensis	ENSSBOP00000025239	61.9512	49.2683
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	57.9487	42.0513	saimiri_boliviensis_boliviensis	ENSSBOP00000018073	34.4512	25
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.1282	48.2051	saimiri_boliviensis_boliviensis	ENSSBOP00000008946	32.8165	24.2894
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.5641	46.1538	saimiri_boliviensis_boliviensis	ENSSBOP00000013418	25.5765	18.8679
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.6154	47.6923	saimiri_boliviensis_boliviensis	ENSSBOP00000003969	40.1274	29.6178
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.5897	46.1538	saimiri_boliviensis_boliviensis	ENSSBOP00000019910	33.1551	24.0642
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	67.6923	52.3077	bison_bison_bison	ENSBBBP00000011621	66	51
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	61.5385	43.0769	myotis_lucifugus	ENSMLUP00000022376	53.3333	37.3333
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.6154	47.6923	myotis_lucifugus	ENSMLUP00000017195	59.1549	43.662
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	62.5641	46.6667	myotis_lucifugus	ENSMLUP00000000465	69.3182	51.7045
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	53.3333	42.5641	myotis_lucifugus	ENSMLUP00000007869	37.6812	30.0725
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	51.7949	myotis_lucifugus	ENSMLUP00000013254	66.8478	54.8913
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	37.4359	26.1538	myotis_lucifugus	ENSMLUP00000021106	57.0312	39.8438
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	47.6923	34.8718	myotis_lucifugus	ENSMLUP00000020937	22.9064	16.7488
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.1026	45.641	myotis_lucifugus	ENSMLUP00000018109	57.8704	41.2037
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.641	48.2051	myotis_lucifugus	ENSMLUP00000000887	34.5013	25.3369
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.1282	50.2564	myotis_lucifugus	ENSMLUP00000017288	39.441	30.4348
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	56.4103	43.0769	chlorocebus_sabaeus	ENSCSAP00000002668	27.2953	20.8437
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	50.2564	38.9744	neovison_vison	ENSNVIP00000001859	49.7462	38.5787
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	31.7949	23.0769	nomascus_leucogenys	ENSNLEP00000031350	21.9081	15.9011
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.1026	50.7692	carlito_syrichta	ENSTSYP00000017529	62.5	49.5
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.1026	49.2308	cervus_hanglu_yarkandensis	ENSCHYP00000021462	56.5611	43.4389
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	68.7179	53.3333	bos_mutus	ENSBMUP00000000280	72.4324	56.2162
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.5897	49.7436	rhinopithecus_bieti	ENSRBIP00000023040	33.3333	26.0753
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	64.6154	51.2821	cebus_imitator	ENSCCAP00000026252	61.165	48.5437
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	54.8718	40	cebus_imitator	ENSCCAP00000028972	29.6399	21.6066
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	60	45.1282	cebus_imitator	ENSCCAP00000028508	31.7935	23.913
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	53.8462	37.9487	cebus_imitator	ENSCCAP00000030204	25.8621	18.2266
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	65.1282	51.2821	moschus_moschiferus	ENSMMSP00000021124	63.1841	49.7512
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	51.2821	40	propithecus_coquereli	ENSPCOP00000012130	64.1026	50
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	61.0256	44.6154	propithecus_coquereli	ENSPCOP00000009901	58.9109	43.0693
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	63.0769	49.2308	pteropus_vampyrus	ENSPVAP00000015907	26.0593	20.339
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	67.6923	57.9487	pteropus_vampyrus	ENSPVAP00000003830	68.0412	58.2474
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	57.4359	45.641	canis_lupus_dingo	ENSCAFP00020003136	48.4848	38.5281
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	56.9231	45.1282	canis_lupus_dingo	ENSCAFP00020003152	48.2609	38.2609
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	42.5641	21.0256	callorhinchus_milii	ENSCMIP00000004961	39.5238	19.5238
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	36.9231	19.4872	latimeria_chalumnae	ENSLACP00000018020	20.9302	11.0465
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	40.5128	23.5897	lepisosteus_oculatus	ENSLOCP00000004258	28.9377	16.8498
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	43.5897	21.0256	xenopus_tropicalis	ENSXETP00000073758	38.2883	18.4685
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	43.0769	22.5641	erpetoichthys_calabaricus	ENSECRP00000021015	32.1839	16.8582
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	40	24.1026	anolis_carolinensis	ENSACAP00000018261	28.9963	17.4721
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	47.1795	29.7436	hippocampus_comes	ENSHCOP00000021053	25.5556	16.1111
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	34.8718	18.9744	podarcis_muralis	ENSPMRP00000035742	32.381	17.619
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	43.0769	26.1538	paramormyrops_kingsleyae	ENSPKIP00000029857	40.5797	24.6377
ENSRFEG00010001731	rhinolophus_ferrumequinum	ENSRFEP00010002402	37.9487	24.1026	scleropages_formosus	ENSSFOP00015009596	37.3737	23.7374

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression