RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSRFEG00010001708	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2591 bases	Strand	Minus strand
Position	10 : 8302162 - 8304752	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSRFEP00010002335	APOBEC_N	PF08210	9.3e-48	1
ENSRFEP00010002335	APOBEC_C	PF05240	3.5e-25	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSRFET00010002575	718	199aa	ENSRFEP00010002335

Gene Model

Click here to download ENSRFEG00010001708's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSRFEG00010001708's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010006631	45.9596	30.8081	rhinolophus_ferrumequinum	ENSRFEP00010002335	45.7286	30.6533
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002402	44.1026	28.7179	rhinolophus_ferrumequinum	ENSRFEP00010002335	43.2161	28.1407
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002639	29.8305	19.322	rhinolophus_ferrumequinum	ENSRFEP00010002335	44.2211	28.6432
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002311	42.5234	26.1682	rhinolophus_ferrumequinum	ENSRFEP00010002335	45.7286	28.1407
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010006586	32.6271	21.1864	rhinolophus_ferrumequinum	ENSRFEP00010002335	38.6935	25.1256
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002028	40.1786	26.3393	rhinolophus_ferrumequinum	ENSRFEP00010002335	45.2261	29.6482

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	37.6884	24.6231	sarcophilus_harrisii	ENSSHAP00000043123	26.0417	17.0139
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	52.2613	36.6834	dasypus_novemcinctus	ENSDNOP00000022598	29.1317	20.4482
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	51.7588	40.7035	cercocebus_atys	ENSCATP00000019442	27.9891	22.0109
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.7839	44.7236	cercocebus_atys	ENSCATP00000041220	59.4737	46.8421
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	55.7789	42.7136	macaca_fascicularis	ENSMFAP00000052254	23.125	17.7083
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	53.7688	43.7186	macaca_nemestrina	ENSMNEP00000045340	56.3158	45.7895
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.2915	46.2312	macaca_nemestrina	ENSMNEP00000040950	29.3671	23.2911
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	55.7789	43.7186	papio_anubis	ENSPANP00000055526	55.2239	43.2836
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.2915	47.2362	mandrillus_leucophaeus	ENSMLEP00000010909	31.0992	25.2011
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	57.2864	45.2261	mandrillus_leucophaeus	ENSMLEP00000025602	60	47.3684
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.7839	45.7286	gorilla_gorilla	ENSGGOP00000019427	56.2189	45.2736
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	60.804	47.2362	gorilla_gorilla	ENSGGOP00000013413	32.4397	25.2011
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.2814	46.7337	pan_paniscus	ENSPPAP00000003356	58.9474	48.9474
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.2965	46.7337	pan_paniscus	ENSPPAP00000009967	36.7601	28.972
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.799	48.2412	pan_troglodytes	ENSPTRP00000090414	31.9035	25.7373
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.2965	46.7337	pan_troglodytes	ENSPTRP00000065294	29.9492	23.6041
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.2965	48.7437	pongo_abelii	ENSPPYP00000041985	31.6354	26.0054
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.7839	46.7337	pongo_abelii	ENSPPYP00000013199	59.4737	48.9474
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	60.3015	48.7437	homo_sapiens	ENSP00000309749	32.1716	26.0054
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.2915	46.2312	homo_sapiens	ENSP00000216099	30.0518	23.8342
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.2814	47.2362	homo_sapiens	ENSP00000355340	58.9474	49.4737
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.2965	45.7286	ursus_americanus	ENSUAMP00000004887	66.2921	51.1236
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	54.2714	43.2161	vulpes_vulpes	ENSVVUP00000019758	61.0169	48.5876
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.799	44.7236	panthera_leo	ENSPLOP00000027854	63.6364	47.5936
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.799	44.7236	panthera_pardus	ENSPPRP00000009193	63.6364	47.5936
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	63.3166	52.2613	balaenoptera_musculus	ENSBMSP00010013859	59.7156	49.2891
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	61.809	47.2362	equus_asinus	ENSEASP00005058077	31.701	24.2268
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	48.7437	38.191	equus_asinus	ENSEASP00005060941	53.8889	42.2222
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.799	50.2513	equus_asinus	ENSEASP00005038789	36.7284	30.8642
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	60.804	45.2261	equus_asinus	ENSEASP00005027361	31.1856	23.1959
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	62.3116	47.2362	equus_caballus	ENSECAP00000027876	21.3425	16.179
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	60.3015	47.2362	sus_scrofa	ENSSSCP00000038941	44.7761	35.0746
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	48.2412	33.1658	marmota_marmota_marmota	ENSMMMP00000015611	47.5248	32.6733
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	53.2663	40.7035	heterocephalus_glaber_female	ENSHGLP00000060665	26.7677	20.4545
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	51.7588	39.6985	heterocephalus_glaber_female	ENSHGLP00000057408	45.7778	35.1111
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	60.804	47.2362	ursus_maritimus	ENSUMAP00000019746	57.346	44.5498
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	37.6884	23.1156	vombatus_ursinus	ENSVURP00010031524	25.1678	15.4362
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	38.191	21.608	monodelphis_domestica	ENSMODP00000040505	29.2308	16.5385
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	51.7588	37.1859	microcebus_murinus	ENSMICP00000044232	50.2439	36.0976
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.794	48.2412	aotus_nancymaae	ENSANAP00000024763	30.3109	24.8705
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	50.2513	37.6884	otolemur_garnettii	ENSOGAP00000021125	28.49	21.3675
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	53.7688	37.1859	otolemur_garnettii	ENSOGAP00000015570	28.084	19.4226
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	53.2663	41.7085	otolemur_garnettii	ENSOGAP00000021819	30.0283	23.5127
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	37.6884	23.6181	phascolarctos_cinereus	ENSPCIP00000049844	28.8462	18.0769
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.799	50.2513	saimiri_boliviensis_boliviensis	ENSSBOP00000033207	39.1447	32.8947
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	57.7889	42.2111	myotis_lucifugus	ENSMLUP00000017607	37.2168	27.1845
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	57.7889	46.2312	chlorocebus_sabaeus	ENSCSAP00000002677	31.0811	24.8649
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.2814	46.2312	chlorocebus_sabaeus	ENSCSAP00000002694	58.9474	48.4211
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	57.2864	41.206	prolemur_simus	ENSPSMP00000006323	28.4289	20.4489
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	59.799	45.2261	neovison_vison	ENSNVIP00000001831	69.186	52.3256
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.2915	45.2261	rhinopithecus_roxellana	ENSRROP00000008207	31.016	24.0642
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	55.7789	45.2261	rhinopithecus_roxellana	ENSRROP00000011299	31.4448	25.4958
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.2915	46.2312	rhinopithecus_roxellana	ENSRROP00000009246	31.0992	24.6649
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	49.2462	39.196	nomascus_leucogenys	ENSNLEP00000028969	26.8493	21.3699
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.7839	45.7286	nomascus_leucogenys	ENSNLEP00000046008	59.4737	47.8947
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.7839	40.7035	carlito_syrichta	ENSTSYP00000028083	61.413	44.0217
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	57.2864	42.2111	carlito_syrichta	ENSTSYP00000018841	30.7278	22.6415
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	51.7588	38.191	carlito_syrichta	ENSTSYP00000014121	56.9061	41.9889
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.7839	43.7186	rhinopithecus_bieti	ENSRBIP00000013574	30.7902	23.7057
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	56.2814	45.2261	rhinopithecus_bieti	ENSRBIP00000037423	31.728	25.4958
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.794	46.7337	rhinopithecus_bieti	ENSRBIP00000012693	32.3204	25.6906
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	58.794	46.7337	cebus_imitator	ENSCCAP00000026256	52.9412	42.0814
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	36.6834	27.6382	propithecus_coquereli	ENSPCOP00000020218	55.7252	41.9847
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	40.201	30.6533	propithecus_coquereli	ENSPCOP00000012935	60.6061	46.2121
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	47.2362	37.6884	pteropus_vampyrus	ENSPVAP00000008915	38.3673	30.6122
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	60.804	44.7236	canis_lupus_dingo	ENSCAFP00020003112	63.6842	46.8421
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	35.1759	17.5879	callorhinchus_milii	ENSCMIP00000004961	33.3333	16.6667
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	32.1608	18.593	latimeria_chalumnae	ENSLACP00000018020	18.6047	10.7558
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	35.6784	23.1156	lepisosteus_oculatus	ENSLOCP00000004258	26.0073	16.8498
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	36.6834	21.608	xenopus_tropicalis	ENSXETP00000073758	32.8829	19.3694
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	36.6834	21.1055	erpetoichthys_calabaricus	ENSECRP00000021015	27.9693	16.092
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	35.6784	18.0905	anolis_carolinensis	ENSACAP00000018261	26.3941	13.3829
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	33.1658	15.5779	podarcis_muralis	ENSPMRP00000035742	31.4286	14.7619
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	32.6633	21.1055	paramormyrops_kingsleyae	ENSPKIP00000029857	31.401	20.2899
ENSRFEG00010001708	rhinolophus_ferrumequinum	ENSRFEP00010002335	33.1658	21.608	scleropages_formosus	ENSSFOP00015009596	33.3333	21.7172

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression