RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSRFEG00010001693	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4766 bases	Strand	Minus strand
Position	10 : 8292961 - 8297726	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSRFEP00010002311	APOBEC_N	PF08210	4e-45	1
ENSRFEP00010002311	APOBEC_C	PF05240	4.1e-28	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSRFET00010002550	1384	214aa	ENSRFEP00010002311

Gene Model

Click here to download ENSRFEG00010001693's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSRFEG00010001693's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010006631	48.9899	32.8283	rhinolophus_ferrumequinum	ENSRFEP00010002311	45.3271	30.3738
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002402	52.3077	32.3077	rhinolophus_ferrumequinum	ENSRFEP00010002311	47.6636	29.4393
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002639	37.2881	22.7119	rhinolophus_ferrumequinum	ENSRFEP00010002311	51.4019	31.3084
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002335	45.7286	28.1407	rhinolophus_ferrumequinum	ENSRFEP00010002311	42.5234	26.1682
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010006586	35.1695	20.7627	rhinolophus_ferrumequinum	ENSRFEP00010002311	38.785	22.8972
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002028	38.8393	23.2143	rhinolophus_ferrumequinum	ENSRFEP00010002311	40.6542	24.2991

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	37.3832	21.9626	sarcophilus_harrisii	ENSSHAP00000043123	27.7778	16.3194
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.6822	46.729	callithrix_jacchus	ENSCJAP00000073454	64.3902	48.7805
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	57.0093	42.5234	cercocebus_atys	ENSCATP00000012268	61.3065	45.7286
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	43.4579	macaca_fascicularis	ENSMFAP00000017385	61.4286	44.2857
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.8131	43.4579	macaca_mulatta	ENSMMUP00000053576	49.2308	35.7692
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	43.4579	macaca_nemestrina	ENSMNEP00000031743	61.6114	44.0758
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	49.0654	35.9813	papio_anubis	ENSPANP00000048484	43.2099	31.6872
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	43.9252	mandrillus_leucophaeus	ENSMLEP00000018470	61.6114	44.5498
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.3458	43.9252	pan_paniscus	ENSPPAP00000026886	63.5	47
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.3458	43.9252	pan_troglodytes	ENSPTRP00000083401	63.5	47
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	42.9907	pongo_abelii	ENSPPYP00000041270	61.1374	43.6019
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	57.0093	42.0561	homo_sapiens	ENSP00000411754	66.6667	49.1803
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	63.5514	44.8598	canis_lupus_familiaris	ENSCAFP00845030766	54.4	38.4
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	62.6168	48.1308	ursus_americanus	ENSUAMP00000004881	60.6335	46.6063
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	63.0841	46.2617	vulpes_vulpes	ENSVVUP00000019753	44.8505	32.8904
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	49.0654	ailuropoda_melanoleuca	ENSAMEP00000011384	52	42
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	65.4206	51.4019	felis_catus	ENSFCAP00000059112	43.8871	34.4828
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.6822	48.1308	mustela_putorius_furo	ENSMPUP00000013141	34.4648	26.893
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	62.1495	51.4019	tursiops_truncatus	ENSTTRP00000001189	74.7191	61.7978
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.486	51.8692	delphinapterus_leucas	ENSDLEP00000014878	25.8427	20.7865
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	67.757	52.3364	physeter_catodon	ENSPCTP00005011753	34.5238	26.6667
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	68.2243	55.1402	panthera_pardus	ENSPPRP00000009485	75.2577	60.8247
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	62.1495	49.0654	balaenoptera_musculus	ENSBMSP00010013875	73.8889	58.3333
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	66.3551	55.1402	equus_asinus	ENSEASP00005036918	45.6592	37.9421
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	56.0748	40.1869	loxodonta_africana	ENSLAFP00000026875	32.6087	23.3696
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	66.3551	55.1402	equus_caballus	ENSECAP00000034895	57.2581	47.5806
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	50.4673	37.3832	procavia_capensis	ENSPCAP00000014600	62.069	45.977
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.486	50	capra_hircus	ENSCHIP00000032712	36.8984	28.6096
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	63.0841	50	sus_scrofa	ENSSSCP00000049864	55.5556	44.0329
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	62.6168	50.9346	camelus_dromedarius	ENSCDRP00005019466	31.6785	25.7683
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.6822	49.0654	bos_taurus	ENSBTAP00000003115	34.2857	27.2727
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	63.5514	50.9346	ovis_aries_rambouillet	ENSOARP00020015068	36.5591	29.3011
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	45.7944	36.9159	oryctolagus_cuniculus	ENSOCUP00000035226	19.2913	15.5512
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	42.5234	marmota_marmota_marmota	ENSMMMP00000015540	55.6034	39.2241
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	53.7383	41.1215	dipodomys_ordii	ENSDORP00000022770	30.2632	23.1579
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	51.4019	37.3832	urocitellus_parryii	ENSUPAP00010028216	51.1628	37.2093
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	43.9252	cricetulus_griseus_chok1gshd	ENSCGRP00001025355	31.2349	22.7603
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.215	44.8598	mesocricetus_auratus	ENSMAUP00000010970	31.7191	23.2446
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	55.6075	41.1215	mus_caroli	MGP_CAROLIEiJ_P0039006	27.0455	20
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	54.6729	40.6542	mus_spretus	MGP_SPRETEiJ_P0040813	26.5909	19.7727
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	43.4579	mus_pahari	MGP_PahariEiJ_P0042359	29.1196	20.9932
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	55.1402	41.1215	mus_musculus	ENSMUSP00000135027	26.8182	20
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.215	42.0561	rattus_norvegicus	ENSRNOP00000095626	29.5045	20.2703
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	55.1402	41.5888	mus_spicilegus	ENSMSIP00000034718	26.8182	20.2273
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	58.4112	44.3925	cavia_porcellus	ENSCPOP00000008311	30.4878	23.1707
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	44.3925	heterocephalus_glaber_female	ENSHGLP00000024290	62.8019	45.8937
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.486	50.9346	ursus_maritimus	ENSUMAP00000019740	65.4028	51.6588
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	38.3178	21.4953	vombatus_ursinus	ENSVURP00010031524	27.5168	15.4362
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	65.4206	50	bos_grunniens	ENSBGRP00000004947	57.1429	43.6735
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	40.6542	32.7103	vicugna_pacos	ENSVPAP00000010345	68.5039	55.1181
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.486	49.0654	bos_indicus_hybrid	ENSBIXP00005043951	34.8485	26.5152
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	37.8505	20.5607	monodelphis_domestica	ENSMODP00000040505	31.1538	16.9231
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	58.4112	43.4579	chinchilla_lanigera	ENSCLAP00000024206	61.8812	46.0396
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.6822	44.8598	aotus_nancymaae	ENSANAP00000015030	58.9286	42.8571
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	38.3178	21.028	phascolarctos_cinereus	ENSPCIP00000049844	31.5385	17.3077
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	53.271	39.2523	tupaia_belangeri	ENSTBEP00000001321	68.2635	50.2994
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.486	51.8692	monodon_monoceros	ENSMMNP00015027558	27.0588	21.7647
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	67.2897	54.6729	phocoena_sinus	ENSPSNP00000013086	34.5324	28.0576
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	57.9439	44.3925	saimiri_boliviensis_boliviensis	ENSSBOP00000027153	52.3207	40.0844
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	57.4766	43.9252	ictidomys_tridecemlineatus	ENSSTOP00000006364	59.1346	45.1923
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	0	0	bison_bison_bison	ENSBBBP00000011591	0	0
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	62.1495	49.0654	bison_bison_bison	ENSBBBP00000011581	75.5682	59.6591
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	46.729	33.6449	jaculus_jaculus	ENSJJAP00000014377	27.1003	19.5122
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	57.9439	42.5234	microtus_ochrogaster	ENSMOCP00000025473	29.5238	21.6667
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.8131	43.4579	chlorocebus_sabaeus	ENSCSAP00000002661	60.6635	44.0758
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	50	39.2523	sciurus_vulgaris	ENSSVLP00005019455	23.2609	18.2609
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.215	47.1963	neovison_vison	ENSNVIP00000001830	64.2157	49.5098
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	58.4112	40.1869	nannospalax_galili	ENSNGAP00000019083	29.8329	20.5251
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.8131	44.8598	rhinopithecus_roxellana	ENSRROP00000006181	55.6522	41.7391
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	44.3925	nomascus_leucogenys	ENSNLEP00000018472	61.6114	45.0237
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	54.2056	42.0561	carlito_syrichta	ENSTSYP00000023224	64.0884	49.7238
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.9533	52.3364	cervus_hanglu_yarkandensis	ENSCHYP00000021689	29.3249	23.6287
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	63.0841	50.4673	bos_mutus	ENSBMUP00000000416	35.0649	28.0519
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	68.2243	55.1402	panthera_tigris_altaica	ENSPTIP00000009121	75.2577	60.8247
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.3458	44.8598	rhinopithecus_bieti	ENSRBIP00000010473	60.1896	45.4976
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.215	45.3271	cebus_imitator	ENSCCAP00000001319	61.5023	45.5399
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	64.0187	50.4673	moschus_moschiferus	ENSMMSP00000021032	36.828	29.0323
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	58.4112	42.5234	peromyscus_maniculatus_bairdii	ENSPEMP00000000666	28.6041	20.8238
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.6822	51.8692	catagonus_wagneri	ENSCWAP00000020400	33.1658	27.8894
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	67.2897	55.6075	pteropus_vampyrus	ENSPVAP00000008916	81.8182	67.6136
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	63.0841	44.3925	canis_lupus_dingo	ENSCAFP00020003085	63.3803	44.6009
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	42.9907	25.7009	callorhinchus_milii	ENSCMIP00000004961	43.8095	26.1905
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	37.3832	21.4953	latimeria_chalumnae	ENSLACP00000018020	23.2558	13.3721
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	40.6542	23.8318	lepisosteus_oculatus	ENSLOCP00000004258	31.8681	18.6813
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	39.2523	20.0935	xenopus_tropicalis	ENSXETP00000073758	37.8378	19.3694
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	41.1215	27.1028	erpetoichthys_calabaricus	ENSECRP00000021015	33.7165	22.2222
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	41.1215	23.8318	anolis_carolinensis	ENSACAP00000018261	32.7138	18.9591
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	31.7757	14.486	podarcis_muralis	ENSPMRP00000035742	32.381	14.7619
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	36.9159	24.7664	paramormyrops_kingsleyae	ENSPKIP00000029857	38.1642	25.6039
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	36.9159	22.8972	scleropages_formosus	ENSSFOP00015009596	39.899	24.7475

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression