RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	ENSRFEG00010001693	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4766 bases	Strand	Minus strand
Position	10 : 8292961 - 8297726	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSRFEP00010002311	APOBEC_N	PF08210	4e-45	1
ENSRFEP00010002311	APOBEC_C	PF05240	4.1e-28	2

Showing 1 to 2 of 2 entries

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID
-	ENSRFET00010002550	1384	214aa	ENSRFEP00010002311

Showing 1 to 1 of 1 entries

Gene Model

Click here to download ENSRFEG00010001693's gene model file

Protein-Protein Interaction (PPI)

Click here to download ENSRFEG00010001693's PPI file

Paralogs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010006631	48.9899	32.8283	rhinolophus_ferrumequinum	ENSRFEP00010002311	45.3271	30.3738
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002402	52.3077	32.3077	rhinolophus_ferrumequinum	ENSRFEP00010002311	47.6636	29.4393
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002639	37.2881	22.7119	rhinolophus_ferrumequinum	ENSRFEP00010002311	51.4019	31.3084
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002335	45.7286	28.1407	rhinolophus_ferrumequinum	ENSRFEP00010002311	42.5234	26.1682
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010006586	35.1695	20.7627	rhinolophus_ferrumequinum	ENSRFEP00010002311	38.785	22.8972
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002028	38.8393	23.2143	rhinolophus_ferrumequinum	ENSRFEP00010002311	40.6542	24.2991

Showing 1 to 6 of 6 entries

Orthologs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	37.3832	21.9626	sarcophilus_harrisii	ENSSHAP00000043123	27.7778	16.3194
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	61.6822	46.729	callithrix_jacchus	ENSCJAP00000073454	64.3902	48.7805
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	57.0093	42.5234	cercocebus_atys	ENSCATP00000012268	61.3065	45.7286
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	43.4579	macaca_fascicularis	ENSMFAP00000017385	61.4286	44.2857
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.8131	43.4579	macaca_mulatta	ENSMMUP00000053576	49.2308	35.7692
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	43.4579	macaca_nemestrina	ENSMNEP00000031743	61.6114	44.0758
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	49.0654	35.9813	papio_anubis	ENSPANP00000048484	43.2099	31.6872
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	43.9252	mandrillus_leucophaeus	ENSMLEP00000018470	61.6114	44.5498
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.3458	43.9252	pan_paniscus	ENSPPAP00000026886	63.5	47
ENSRFEG00010001693	rhinolophus_ferrumequinum	ENSRFEP00010002311	59.3458	43.9252	pan_troglodytes	ENSPTRP00000083401	63.5	47

Showing 1 to 10 of 90 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Paralogs
Orthologs