RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPTXG00000008127	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	67338 bases	Strand	Plus strand
Position	ULFR01000008.1 : 6223761 - 6291098	RNA binding domain	Transposase_22
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPTXP00000011513	Transposase_22	PF02994	9.2e-08	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPTXT00000011886	825	274aa	ENSPTXP00000011513

Gene Model

Click here to download ENSPTXG00000008127's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPTXG00000008127's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000015444	75.2101	66.3866	pseudonaja_textilis	ENSPTXP00000011513	65.3285	57.6642
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000027109	55.4487	44.2308	pseudonaja_textilis	ENSPTXP00000011513	63.1387	50.365
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000006081	46.5625	24.6875	pseudonaja_textilis	ENSPTXP00000011513	54.3796	28.8321

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	83.2117	69.708	notechis_scutatus	ENSNSUP00000011540	67.0588	56.1765
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	83.2117	69.708	notechis_scutatus	ENSNSUP00000011539	67.0588	56.1765
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	83.2117	70.438	notechis_scutatus	ENSNSUP00000009547	67.0588	56.7647
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	28.1022	24.0876	laticauda_laticaudata	ENSLLTP00000023678	90.5882	77.6471
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	25.1825	20.438	laticauda_laticaudata	ENSLLTP00000019208	78.4091	63.6364
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	26.2774	22.2628	naja_naja	ENSNNAP00000027897	82.7586	70.1149
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	26.2774	21.5328	naja_naja	ENSNNAP00000001000	82.7586	67.8161
ENSPTXG00000008127	pseudonaja_textilis	ENSPTXP00000011513	22.6277	18.6131	naja_naja	ENSNNAP00000009607	82.6667	68

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression