Description

Ensembl ID ENSPTRG00000042869 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 869 bases Strand Minus strand
Position 1 : 120314543 - 120315411 RNA binding domain CAF1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPTRP00000090981 CAF1 PF04857 1.1e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPTRT00000084614 735 244aa ENSPTRP00000090981

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTRG00000042869pan_troglodytesENSPTRP0000009155677.617373.6462pan_troglodytesENSPTRP0000009098188.114883.6066
ENSPTRG00000042869pan_troglodytesENSPTRP000000782808077.193pan_troglodytesENSPTRP0000009098193.442690.1639
ENSPTRG00000042869pan_troglodytesENSPTRP0000006114875.510273.8775pan_troglodytesENSPTRP0000009098175.819774.1803
ENSPTRG00000042869pan_troglodytesENSPTRP0000002981068.150756.5069pan_troglodytesENSPTRP0000009098181.557467.6229

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098187.295183.6066nomascus_leucogenysENSNLEP0000003449091.810387.931
ENSPTRG00000042869pan_troglodytesENSPTRP00000090981100100pan_paniscusENSPPAP00000036339100100
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098186.065685.2459gorilla_gorillaENSGGOP0000002895099.056698.1132
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.032889.7541ornithorhynchus_anatinusENSOANP0000001647079.649176.8421
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.032889.7541sarcophilus_harrisiiENSSHAP0000004512576.43173.7374
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098185.655779.0984sarcophilus_harrisiiENSSHAP0000000112475.724669.9275
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098185.245981.9672choloepus_hoffmanniENSCHOP0000000060072.982570.1754
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639dasypus_novemcinctusENSDNOP000000242788077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098176.229573.3607erinaceus_europaeusENSEEUP0000001000976.859573.9669
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098176.639375echinops_telfairiENSETEP0000000121677.272775.6198
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098171.721361.4754macaca_mulattaENSMMUP0000005567843.640937.4065
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098178.278776.6393equus_caballusENSECAP0000000407269.202967.7536
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098156.967254.0984procavia_capensisENSPCAP0000001486656.734753.8776
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098144.672140.5738monodelphis_domesticaENSMODP0000004528566.060660
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098172.54167.6229monodelphis_domesticaENSMODP0000004333971.37166.5323
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639monodelphis_domesticaENSMODP000000237898077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098125.819725phascolarctos_cinereusENSPCIP0000000871680.769278.2051
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639phascolarctos_cinereusENSPCIP000000033268077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639equus_asinusENSEASP000050251148077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639vombatus_ursinusENSVURP000100072198077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639loxodonta_africanaENSLAFP000000001958077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098180.327977.459sorex_araneusENSSARP0000000293168.771966.3158
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098161.065643.0328caenorhabditis_elegansY56A3A.20.148.064533.871
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098175.819759.8361drosophila_melanogasterFBpp031108951.246540.4432
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098174.180361.8852ciona_intestinalisENSCINP0000000609665.107954.3165
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098149.180339.3443eptatretus_burgeriENSEBUP0000002428355.045944.0367
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213187.7049callorhinchus_miliiENSCMIP0000003200278.671374.8252
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.032889.3443latimeria_chalumnaeENSLACP0000001074479.370676.2238
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213185.6557lepisosteus_oculatusENSLOCP0000001718378.671373.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803386.4754clupea_harengusENSCHAP0000001069678.321773.7762
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213185.6557danio_rerioENSDARP0000008738578.671373.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803386.0656carassius_auratusENSCARP0000002852978.321773.4266
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393485.2459carassius_auratusENSCARP0000008325877.97272.7273
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803385.6557carassius_auratusENSCARP0000009238378.321773.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213186.0656astyanax_mexicanusENSAMXP0000000829078.671373.4266
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803384.4262ictalurus_punctatusENSIPUP0000003179778.321772.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213186.8852electrophorus_electricusENSEEEP0000004256878.671374.1259
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164esox_luciusENSELUP0000003209678.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803385.6557oncorhynchus_kisutchENSOKIP0000501615278.321773.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803385.6557oncorhynchus_mykissENSOMYP0000008770778.321773.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098184.426277.0492salmo_salarENSSSAP0000010459352.820548.2051
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803385.6557salmo_truttaENSSTUP0000008945678.321773.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803382.7869gadus_morhuaENSGMOP0000000523873.442666.2295
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098182.786973.7705fundulus_heteroclitusENSFHEP0000001409266.447459.2105
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622984.8361poecilia_reticulataENSPREP0000003265779.02172.3776
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622985.2459xiphophorus_maculatusENSXMAP0000003947279.02172.7273
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098190.983682.7869cyclopterus_lumpusENSCLMP0000500155277.622470.6294
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098190.983682.7869oryzias_latipesENSORLP0000004226177.622470.6294
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164oreochromis_niloticusENSONIP0000005238278.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164haplochromis_burtoniENSHBUP0000000076478.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164astatotilapia_callipteraENSACLP0000003473272.580666.129
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098178.688572.1311sparus_aurataENSSAUP0001003627166.666761.1111
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262lates_calcariferENSLCAP0001000226678.671372.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639chrysemys_picta_belliiENSCPBP000000265978077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639crocodylus_porosusENSCPRP000050153598077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622987.2951xenopus_tropicalisENSXETP0000000156475.083170.7641
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622989.3443sphenodon_punctatusENSSPUP0000002231179.298276.4912
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.7541laticauda_laticaudataENSLLTP000000163348076.8421
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.7541notechis_scutatusENSNSUP000000122668076.8421
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.7541pseudonaja_textilisENSPTXP000000054208076.8421
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639anas_platyrhynchos_platyrhynchosENSAPLP000000111008077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639gallus_gallusENSGALP000100222918077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098171.311569.2623meleagris_gallopavoENSMGAP0000001214075.982573.7991
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639serinus_canariaENSSCAP000000127158077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098179.91877.459parus_majorENSPMJP0000000713468.181866.0839
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639pelodiscus_sinensisENSPSIP000000140078077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393482.7869oryzias_melastigmaENSOMEP0000003072877.97270.6294
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164dicentrarchus_labraxENSDLAP0000507294377.319670.4467
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164neolamprologus_brichardiENSNBRP0000002684078.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164amphiprion_perculaENSAPEP0000001303378.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393483.6066takifugu_rubripesENSTRUP0000005223878.245671.5789
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393483.1967oryzias_javanicusENSOJAP0000001726677.97270.979
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164pundamilia_nyerereiENSPNYP0000000012478.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098175.409861.8852ciona_savignyiENSCSAVP0000000348765.714353.9286
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639anser_brachyrhynchusENSABRP000000237338077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098138.114835.6557acanthochromis_polyacanthusENSAPOP0000003183689.423183.6538
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164acanthochromis_polyacanthusENSAPOP0000000475278.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639geospiza_fortisENSGFOP000000098248077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164scophthalmus_maximusENSSMAP0000005744878.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639chelonoidis_abingdoniiENSCABP000000188158077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098154.91834.0164saccharomyces_cerevisiaeYNR052C30.946919.1686
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262cynoglossus_semilaevisENSCSEP0000002867178.671372.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098138.114835.6557hippocampus_comesENSHCOP0000001849289.423183.6538
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639strigops_habroptilaENSSHBP000050125908077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262mastacembelus_armatusENSMAMP0000002385678.671372.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803383.6066labrus_bergyltaENSLBEP0000002124978.321771.3287
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262seriola_dumeriliENSSDUP0000001695578.671372.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639coturnix_japonicaENSCJPP000050124398077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164amphilophus_citrinellusENSACIP0000002788478.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.3443podarcis_muralisENSPMRP000000193168076.4912
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098179.508277.8689ficedula_albicollisENSFALP0000001186567.832266.4336
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622985.2459kryptolebias_marmoratusENSKMAP0000002014979.02172.7273
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.032886.4754paramormyrops_kingsleyaeENSPKIP0000002197879.370673.7762
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098167.213163.5246gopherus_evgoodeiENSGEVP0000500121066.938863.2653
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262seriola_lalandi_dorsalisENSSLDP0000003087778.671372.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098143.442637.7049sinocyclocheilus_grahamiENSSGRP0000003322873.611163.8889
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098159.836154.0984sinocyclocheilus_grahamiENSSGRP0000003322765.765859.4595
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098190.983685.6557sinocyclocheilus_grahamiENSSGRP0000007249777.622473.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098137.704936.0656sinocyclocheilus_grahamiENSSGRP0000000774188.461584.6154
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164maylandia_zebraENSMZEP0000500848978.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262amphiprion_ocellarisENSAOCP0000001372178.671372.028
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.3443naja_najaENSNNAP0000001031471.924368.7697
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622985.6557scleropages_formosusENSSFOP0001502043579.02173.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.0164larimichthys_croceaENSLCRP0000504915478.671371.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639struthio_camelus_australisENSSCUP000000008378077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622986.4754erpetoichthys_calabaricusENSECRP0000000189179.02173.7762
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098181.967274.1803stegastes_partitusENSSPAP0000002513380.321372.6908
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098177.45971.7213stegastes_partitusENSSPAP0000001592176.209770.5645
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.7541salvator_merianaeENSSMRP000000121848076.8421
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098179.098474.1803leptobrachium_leishanenseENSLLEP0000000450966.095961.9863
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639taeniopygia_guttataENSTGUP000000074718077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393483.1967cottoperca_gobioENSCGOP0000001125877.97270.979
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803383.1967sander_luciopercaENSSLUP0000006012778.321770.979
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442689.7541anolis_carolinensisENSACAP000000061248076.8421
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803386.0656cyprinus_carpio_carpioENSCCRP0000005015178.321773.4266
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803385.6557cyprinus_carpio_carpioENSCCRP0000000811178.321773.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639terrapene_carolina_triunguisENSTMTP000000102458077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622984.8361poecilia_formosaENSPFOP0000000154279.02172.3776
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803384.0164anabas_testudineusENSATEP0000002766478.321771.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213186.4754pygocentrus_nattereriENSPNAP0000003269378.671373.7762
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803381.5574gasterosteus_aculeatusENSGACP0000002459477.508768.8581
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098193.442690.1639aquila_chrysaetos_chrysaetosENSACCP000200116288077.193
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393485.2459denticeps_clupeoidesENSDCDP0000004351677.97272.7273
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.622984.8361poecilia_latipinnaENSPLAP0000000745379.02172.3776
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213183.1967cyprinodon_variegatusENSCVAP0000003029678.671370.979
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803385.6557oncorhynchus_tshawytschaENSOTSP0000507489678.321773.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213184.4262betta_splendensENSBSLP0000001674672.347366.2379
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098192.213185.6557myripristis_murdjanENSMMDP0000503923278.671373.0769
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.803384.0164nothobranchius_furzeriENSNFUP0001500464678.321771.6783
ENSPTRG00000042869pan_troglodytesENSPTRP0000009098191.393486.0656hucho_huchoENSHHUP0000006380577.97273.4266

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression