Description

Ensembl ID ENSPTRG00000018762 Gene ID Accession -
Symbol PNLDC1 Alias - Full Name PARN like ribonuclease domain containing exonuclease 1
Status Confidence Length 24179 bases Strand Plus strand
Position 6 : 164107305 - 164131483 RNA binding domain CAF1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPTRP00000086881 CAF1 PF04857 1.6e-77 1
ENSPTRP00000032019 CAF1 PF04857 2.4e-70 1
ENSPTRP00000066581 CAF1 PF04857 2.5e-69 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTRG00000018762pan_troglodytesENSPTRP0000001329339.593123.0047pan_troglodytesENSPTRP0000008688147.64627.6836
ENSPTRG00000018762pan_troglodytesENSPTRP0000008406028.107116.826pan_troglodytesENSPTRP0000008688127.683616.5725

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.16292.2787nomascus_leucogenysENSNLEP0000001374096.153894.2308
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.726993.032pongo_abeliiENSPPYP0000001920496.730895
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688199.43598.6817homo_sapiensENSP0000037600799.43598.6817
ENSPTRG00000018762pan_troglodytesENSPTRP00000086881100100pan_paniscusENSPPAP00000007402100100
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688199.058498.1168gorilla_gorillaENSGGOP0000001921499.058498.1168
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.952959.322ornithorhynchus_anatinusENSOANP0000001931273.431758.1181
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688187.382375.1412sarcophilus_harrisiiENSSHAP0000001789679.725168.5567
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688152.91943.1262notamacropus_eugeniiENSMEUP0000001086361.08749.7826
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688140.866336.1582notamacropus_eugeniiENSMEUP0000001280375.347266.6667
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.220385.6874dasypus_novemcinctusENSDNOP0000001064293.045185.5263
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688151.224145.951erinaceus_europaeusENSEEUP0000000523365.700558.9372
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688178.907770.2448echinops_telfairiENSETEP0000000616584.475875.2016
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688197.175191.9021callithrix_jacchusENSCJAP0000002183797.358592.0755
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688198.681795.4802cercocebus_atysENSCATP0000001879798.681795.4802
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688184.934180.226macaca_fascicularisENSMFAP0000006343380.679876.2075
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688198.493495.8569macaca_mulattaENSMMUP0000000559691.915689.4552
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688198.493495.6685macaca_nemestrinaENSMNEP0000002097898.493495.6685
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688198.493496.0452papio_anubisENSPANP0000001860198.493496.0452
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.915392.2787mandrillus_leucophaeusENSMLEP0000004007198.245695.5166
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.408785.6874vulpes_vulpesENSVVUP0000000880383.501776.5993
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538687.9473equus_caballusENSECAP0000004481894.538687.9473
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538687.7589urocitellus_parryiiENSUPAP0001000845594.538687.7589
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.16286.629ailuropoda_melanoleucaENSAMEP0000001622894.16286.629
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538687.194panthera_pardusENSPPRP0000002225294.538687.194
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.03285.1224capra_hircusENSCHIP0000000165593.207685.283
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.291987.7589marmota_marmota_marmotaENSMMMP0000001080995.291987.7589
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688184.557476.0829procavia_capensisENSPCAP0000001328884.71776.2264
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.408785.3107mus_caroliMGP_CAROLIEiJ_P004265993.408785.3107
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.915387.7589ictidomys_tridecemlineatusENSSTOP0000000501294.915387.7589
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688187.758978.7194cavia_porcellusENSCPOP0000001554389.961480.695
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688197.551893.4087saimiri_boliviensis_boliviensisENSSBOP0000000490997.551893.4087
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.408785.3107mus_spicilegusENSMSIP0000003193793.408785.3107
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.59785.8757ovis_aries_rambouilletENSOARP0002000828394.486786.692
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688180.414374.0113tupaia_belangeriENSTBEP0000000791882.115475.5769
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.915387.5706canis_lupus_familiarisENSCAFP0084500279194.915387.5706
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688191.902180.9793cricetulus_griseus_chok1gshdENSCGRP0000100566491.729380.8271
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.576366.1017cricetulus_griseus_chok1gshdENSCGRP0000100998086.652176.8053
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688187.005774.5763monodelphis_domesticaENSMODP0000000920886.679274.2964
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688172.504766.6667ochotona_princepsENSOPRP0000000351972.504766.6667
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.59785.8757balaenoptera_musculusENSBMSP0001001512393.773686.0377
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688188.888979.4727dipodomys_ordiiENSDORP0000001082590.076380.5343
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.576365.9134mesocricetus_auratusENSMAUP0000001182384.255374.4681
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.408785.8757oryctolagus_cuniculusENSOCUP0000001192993.408785.8757
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688197.551892.2787aotus_nancymaaeENSANAP0000003415897.551892.2787
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688187.758974.5763phascolarctos_cinereusENSPCIP0000003150187.429674.2964
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688192.655484.5574bos_grunniensENSBGRP0000004231195.164486.8472
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538687.3823panthera_leoENSPLOP0000000522094.538687.3823
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688191.525483.0508bos_taurusENSBTAP0000002018091.871583.3648
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688192.46785.6874canis_lupus_dingoENSCAFP0002002248493.881586.9981
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.856988.7006propithecus_coquereliENSPCOP0000002664595.856988.7006
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.726984.7458moschus_moschiferusENSMMSP0000000310094.726984.7458
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.16286.2524phocoena_sinusENSPSNP0000002480994.16286.2524
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688173.446367.6083pteropus_vampyrusENSPVAP0000000504273.584967.7358
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.59784.3691heterocephalus_glaber_femaleENSHGLP0000000960482.421274.2952
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688183.804175.3296ursus_americanusENSUAMP0000001997684.12175.6144
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538687.9473equus_asinusENSEASP0000504991894.538687.9473
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688188.512279.8493jaculus_jaculusENSJJAP0000000498590.733681.8533
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688196.233588.1356prolemur_simusENSPSMP0000002761896.233588.1356
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688189.453982.2976panthera_tigris_altaicaENSPTIP0000001092291.876284.5261
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688184.180876.6478ursus_maritimusENSUMAP0000001620089.939681.8913
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688170.998159.887vombatus_ursinusENSVURP0001002486582.675469.7368
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688187.19474.7646vombatus_ursinusENSVURP0001002358086.704174.3446
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688188.700680.9793sciurus_vulgarisENSSVLP0000501661790.751482.8516
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.726986.629sciurus_vulgarisENSSVLP0000501855294.726986.629
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688158.380452.7307loxodonta_africanaENSLAFP0000002377690.909182.1114
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.103687.0057cervus_hanglu_yarkandensisENSCHYP0000003411595.103687.0057
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688187.382379.8493delphinapterus_leucasENSDLEP0000001825788.718981.0707
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688191.902184.7458rhinolophus_ferrumequinumENSRFEP0001000950595.126787.7193
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.408785.1224rattus_norvegicusENSRNOP0000005715793.408785.1224
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.726986.4407bos_indicus_hybridENSBIXP0000501082884.113776.7559
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.973685.6874mus_pahariMGP_PahariEiJ_P005494993.973685.6874
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.785385.8757peromyscus_maniculatus_bairdiiENSPEMP0000001736393.60985.7143
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688198.305195.4802rhinopithecus_bietiENSRBIP0000001964298.305195.4802
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538686.2524bison_bison_bisonENSBBBP0000001831194.71786.4151
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.856989.6422carlito_syrichtaENSTSYP0000000513795.856989.6422
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688197.551893.4087cebus_imitatorENSCCAP0000001685797.551893.4087
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688192.655482.8625octodon_degusENSODEP0000001080092.655482.8625
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.973686.629neovison_visonENSNVIP0000001317193.973686.629
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.59786.8173nannospalax_galiliENSNGAP0000001722493.421186.6541
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.103687.5706sus_scrofaENSSSCP0000000437295.103687.5706
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.220383.6158camelus_dromedariusENSCDRP0000502123293.220383.6158
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.973686.064mustela_putorius_furoENSMPUP0000000488093.973686.064
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688167.984962.1469tursiops_truncatusENSTTRP0000000987268.113262.2642
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538687.194felis_catusENSFCAP0000000262194.538687.194
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688158.003853.484physeter_catodonENSPCTP0000503103090.058583.0409
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.03285.1224mus_spretusMGP_SPRETEiJ_P004461393.03285.1224
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.103687.0057catagonus_wagneriENSCWAP0000000385995.103687.0057
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688196.421887.9473microcebus_murinusENSMICP0000000731796.421887.9473
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688192.843783.2392chinchilla_lanigeraENSCLAP0000000453692.843783.2392
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.103686.064myotis_lucifugusENSMLUP0000000068095.103686.064
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.785385.8757microtus_ochrogasterENSMOCP0000001494893.433485.5535
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.350386.4407monodon_monocerosENSMMNP0001501546394.350386.4407
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688195.480288.7006otolemur_garnettiiENSOGAP0000000656895.841289.0359
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538691.9021chlorocebus_sabaeusENSCSAP0000000862896.168693.4866
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688193.220385.3107mus_musculusENSMUSP0000012937793.220385.3107
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.726991.5254rhinopithecus_roxellanaENSRROP0000004141896.730893.4615
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688194.538686.2524bos_mutusENSBMUP0000000374094.538686.2524
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688141.619620.904caenorhabditis_elegansK10C8.1.139.045919.6113
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688149.905829.9435eptatretus_burgeriENSEBUP0000001280150.572530.3435
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688176.836262.5235chrysemys_picta_belliiENSCPBP0000000502780.31565.3543
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688179.284464.5951crocodylus_porosusENSCPRP0000502558279.284464.5951
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688147.08136.7232sphenodon_punctatusENSSPUP0000000609781.699363.7255
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688124.293817.5141notechis_scutatusENSNSUP0000002164070.491850.8197
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688139.171429.1902pseudonaja_textilisENSPTXP0000000190971.232953.0822
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.011358.3804anas_platyrhynchos_platyrhynchosENSAPLP0000000662973.595558.0524
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688172.504757.8154gallus_gallusENSGALP0001000600267.781754.0493
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688163.653550.4708meleagris_gallopavoENSMGAP0000001313966.404752.6523
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688146.704335.4049serinus_canariaENSSCAP0000001537074.924556.7976
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688173.446357.0621parus_majorENSPMJP0000001213873.584957.1698
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688143.691234.4633pelodiscus_sinensisENSPSIP0000001267877.852361.4094
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.576358.9454anser_brachyrhynchusENSABRP0000002041674.296458.7242
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688161.581945.1977geospiza_fortisENSGFOP0000000826569.722851.1727
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688148.399237.8531chelonoidis_abingdoniiENSCABP0000002465779.076961.8462
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688143.879532.3917strigops_habroptilaENSSHBP0000501317970.606152.1212
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688172.69357.4388coturnix_japonicaENSCJPP0000500558565.870352.0478
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688167.984952.1657podarcis_muralisENSPMRP0000000117370.923454.4204
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688169.868254.2373ficedula_albicollisENSFALP0000001261273.611157.1429
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688175.706262.7119gopherus_evgoodeiENSGEVP0000502949279.920566.2028
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688157.815444.4444naja_najaENSNNAP0000002146371.229754.7564
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688161.581948.3992struthio_camelus_australisENSSCUP0000002474972.026456.6079
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688164.783451.0358salvator_merianaeENSSMRP0000002888058.404146.0102
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.011357.2505taeniopygia_guttataENSTGUP0000001177274.011357.2505
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688174.576359.322anolis_carolinensisENSACAP0000001343074.858259.5463
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688168.549954.9906terrapene_carolina_triunguisENSTMTP0000000090974.285759.5918
ENSPTRG00000018762pan_troglodytesENSPTRP0000008688173.634758.1921aquila_chrysaetos_chrysaetosENSACCP0002000723973.084157.757

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression