Description

Ensembl ID ENSPTRG00000002562 Gene ID Accession -
Symbol DDX50 Alias - Full Name DExD-box helicase 50
Status Confidence Length 46608 bases Strand Plus strand
Position 10 : 69965261 - 70011868 RNA binding domain ResIII , DEAD , GUCT
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPTRP00000004429 ResIII PF04851 5.9e-10 1
ENSPTRP00000004429 DEAD PF00270 2.7e-47 2
ENSPTRP00000004429 GUCT PF08152 3.4e-27 3
ENSPTRP00000059960 ResIII PF04851 6.6e-10 1
ENSPTRP00000059960 DEAD PF00270 3.1e-47 2
ENSPTRP00000059960 GUCT PF08152 3.1e-27 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
DDX50-201 ENSPTRT00000073896 4270 737aa ENSPTRP00000059960
DDX50-203 ENSPTRT00000004802 2139 713aa ENSPTRP00000004429
DDX50-202 ENSPTRT00000108220 156 51aa ENSPTRP00000083326

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTRG00000002562pan_troglodytesENSPTRP0000007054490.851787.6972pan_troglodytesENSPTRP0000005996039.077337.7205
ENSPTRG00000002562pan_troglodytesENSPTRP0000008398389.354884.5161pan_troglodytesENSPTRP0000005996037.584835.5495
ENSPTRG00000002562pan_troglodytesENSPTRP0000005452150.233625.7009pan_troglodytesENSPTRP0000005996029.172314.9254
ENSPTRG00000002562pan_troglodytesENSPTRP0000008878442.521425.8547pan_troglodytesENSPTRP0000005996027.001416.4179
ENSPTRG00000002562pan_troglodytesENSPTRP0000008146025.412214.549pan_troglodytesENSPTRP0000005996035.549520.3528
ENSPTRG00000002562pan_troglodytesENSPTRP0000001137728.754416.6473pan_troglodytesENSPTRP0000005996033.514219.403
ENSPTRG00000002562pan_troglodytesENSPTRP0000002704250.490232.1078pan_troglodytesENSPTRP0000005996027.951217.7748
ENSPTRG00000002562pan_troglodytesENSPTRP0000008978446.745629.2899pan_troglodytesENSPTRP0000005996021.438313.4328
ENSPTRG00000002562pan_troglodytesENSPTRP0000009058218.759.375pan_troglodytesENSPTRP000000599602.442331.22117
ENSPTRG00000002562pan_troglodytesENSPTRP0000005830734.81618.4049pan_troglodytesENSPTRP0000005996030.800516.2822
ENSPTRG00000002562pan_troglodytesENSPTRP0000006364447.457628.5714pan_troglodytesENSPTRP0000005996026.594316.0109
ENSPTRG00000002562pan_troglodytesENSPTRP0000002121939.253722.5373pan_troglodytesENSPTRP0000005996035.685220.4885
ENSPTRG00000002562pan_troglodytesENSPTRP0000009257035.526318.9145pan_troglodytesENSPTRP0000005996029.30815.6038
ENSPTRG00000002562pan_troglodytesENSPTRP0000009176937.588721.4539pan_troglodytesENSPTRP0000005996028.765316.4179
ENSPTRG00000002562pan_troglodytesENSPTRP0000000760141.614923.1884pan_troglodytesENSPTRP0000005996027.272715.1967
ENSPTRG00000002562pan_troglodytesENSPTRP0000006374638.775522.9199pan_troglodytesENSPTRP0000005996033.514219.81
ENSPTRG00000002562pan_troglodytesENSPTRP0000000443168.199256.0664pan_troglodytesENSPTRP0000005996072.455959.5658
ENSPTRG00000002562pan_troglodytesENSPTRP0000008726728.658517.1951pan_troglodytesENSPTRP0000005996031.88619.1316
ENSPTRG00000002562pan_troglodytesENSPTRP0000006838227.197815.522pan_troglodytesENSPTRP0000005996026.865715.3324
ENSPTRG00000002562pan_troglodytesENSPTRP0000000190726.248514.7503pan_troglodytesENSPTRP0000005996030.664917.232
ENSPTRG00000002562pan_troglodytesENSPTRP0000006548540.897821.4464pan_troglodytesENSPTRP0000005996022.252411.6689
ENSPTRG00000002562pan_troglodytesENSPTRP0000008881339.686121.0762pan_troglodytesENSPTRP0000005996024.016312.7544
ENSPTRG00000002562pan_troglodytesENSPTRP0000007861535.10220pan_troglodytesENSPTRP0000005996023.337913.2972
ENSPTRG00000002562pan_troglodytesENSPTRP0000003271237.842821.5722pan_troglodytesENSPTRP0000005996028.086816.0109
ENSPTRG00000002562pan_troglodytesENSPTRP0000008995832.872919.8895pan_troglodytesENSPTRP0000005996032.293119.5387
ENSPTRG00000002562pan_troglodytesENSPTRP0000004115737.191422.9938pan_troglodytesENSPTRP0000005996032.700120.2171
ENSPTRG00000002562pan_troglodytesENSPTRP0000009201024.390213.4146pan_troglodytesENSPTRP000000599602.71371.49254
ENSPTRG00000002562pan_troglodytesENSPTRP0000001482550.492631.2808pan_troglodytesENSPTRP0000005996027.815517.232
ENSPTRG00000002562pan_troglodytesENSPTRP0000007112144.235326.1176pan_troglodytesENSPTRP0000005996025.508815.0611
ENSPTRG00000002562pan_troglodytesENSPTRP0000007273847.256127.439pan_troglodytesENSPTRP0000005996021.031212.2117
ENSPTRG00000002562pan_troglodytesENSPTRP0000008544745.077726.943pan_troglodytesENSPTRP0000005996011.80467.05563
ENSPTRG00000002562pan_troglodytesENSPTRP0000007028847.010929.3478pan_troglodytesENSPTRP0000005996023.473514.654
ENSPTRG00000002562pan_troglodytesENSPTRP0000007984045.558727.7937pan_troglodytesENSPTRP0000005996021.573913.1615
ENSPTRG00000002562pan_troglodytesENSPTRP0000001409837.96320.7407pan_troglodytesENSPTRP0000005996027.815515.1967
ENSPTRG00000002562pan_troglodytesENSPTRP0000006282232.925218.6395pan_troglodytesENSPTRP0000005996032.835818.5889
ENSPTRG00000002562pan_troglodytesENSPTRP0000000930229.93216.5533pan_troglodytesENSPTRP0000005996035.820919.81
ENSPTRG00000002562pan_troglodytesENSPTRP0000006412534.379320.6003pan_troglodytesENSPTRP0000005996034.192720.4885
ENSPTRG00000002562pan_troglodytesENSPTRP0000003877138.181823.0303pan_troglodytesENSPTRP0000005996034.192720.6242
ENSPTRG00000002562pan_troglodytesENSPTRP0000006384116.5958.16853pan_troglodytesENSPTRP0000005996026.187212.8901
ENSPTRG00000002562pan_troglodytesENSPTRP0000001617327.505316.6311pan_troglodytesENSPTRP0000005996035.006821.1669
ENSPTRG00000002562pan_troglodytesENSPTRP0000000952535.666720.5pan_troglodytesENSPTRP0000005996029.036616.6893
ENSPTRG00000002562pan_troglodytesENSPTRP0000000732427.885715.5429pan_troglodytesENSPTRP0000005996033.107218.4532
ENSPTRG00000002562pan_troglodytesENSPTRP0000007839227.534414.8936pan_troglodytesENSPTRP0000005996029.850716.1465
ENSPTRG00000002562pan_troglodytesENSPTRP0000007752728.571417.1659pan_troglodytesENSPTRP0000005996033.649920.2171
ENSPTRG00000002562pan_troglodytesENSPTRP0000004631927.614615.5112pan_troglodytesENSPTRP0000005996031.88617.9104
ENSPTRG00000002562pan_troglodytesENSPTRP0000002006030.945918.2432pan_troglodytesENSPTRP0000005996031.071918.3175
ENSPTRG00000002562pan_troglodytesENSPTRP0000001544136.560920.3673pan_troglodytesENSPTRP0000005996029.715116.5536
ENSPTRG00000002562pan_troglodytesENSPTRP0000001829542.23624.4306pan_troglodytesENSPTRP0000005996027.679816.0109
ENSPTRG00000002562pan_troglodytesENSPTRP0000004747535.499219.1759pan_troglodytesENSPTRP0000005996030.393516.4179
ENSPTRG00000002562pan_troglodytesENSPTRP0000005135438.287620.0323pan_troglodytesENSPTRP0000005996032.157416.825
ENSPTRG00000002562pan_troglodytesENSPTRP0000009219039.491921.709pan_troglodytesENSPTRP0000005996023.202212.7544
ENSPTRG00000002562pan_troglodytesENSPTRP0000008311239.225220.339pan_troglodytesENSPTRP0000005996021.98111.3976
ENSPTRG00000002562pan_troglodytesENSPTRP0000004466041.407923.8095pan_troglodytesENSPTRP0000005996027.13715.6038
ENSPTRG00000002562pan_troglodytesENSPTRP0000001621039.739423.2899pan_troglodytesENSPTRP0000005996033.107219.403
ENSPTRG00000002562pan_troglodytesENSPTRP0000001806850.585525.7611pan_troglodytesENSPTRP0000005996029.30814.9254
ENSPTRG00000002562pan_troglodytesENSPTRP0000007604250.585525.7611pan_troglodytesENSPTRP0000005996029.30814.9254

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.7286nomascus_leucogenysENSNLEP0000001419110099.7286
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.8643pongo_abeliiENSPPYP0000000277510099.8643
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.8643homo_sapiensENSP0000036268710099.8643
ENSPTRG00000002562pan_troglodytesENSPTRP00000059960100100pan_paniscusENSPPAP00000035895100100
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.8643gorilla_gorillaENSGGOP0000001896710099.8643
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996087.381379.5115sarcophilus_harrisiiENSSHAP0000000653886.792478.9757
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996087.92486.1601choloepus_hoffmanniENSCHOP0000000020298.033396.0666
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996083.853579.7829dasypus_novemcinctusENSDNOP0000000129995.665691.0217
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996086.974285.2103erinaceus_europaeusENSEEUP0000000530087.210985.4422
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996088.466886.2958echinops_telfairiENSETEP0000001142188.828386.6485
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.5929callithrix_jacchusENSCJAP0000003508610099.5929
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.42296.3365cercocebus_atysENSCATP0000001715998.626497.5275
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996091.180591.0448macaca_fascicularisENSMFAP0000002509410099.8512
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.5929macaca_mulattaENSMMUP0000000135010099.5929
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996093.622893.2157macaca_nemestrinaENSMNEP0000001516897.595597.1711
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.964797.422mandrillus_leucophaeusENSMLEP0000002637299.039898.4911
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996077.069275.1696vulpes_vulpesENSVVUP0000002793594.352292.0266
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996091.587590.7734equus_caballusENSECAP0000002064498.110597.2384
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321697.6934urocitellus_parryiiENSUPAP0001001065899.18797.561
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.6934ailuropoda_melanoleucaENSAMEP0000001901298.511597.429
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321698.2361panthera_pardusENSPPRP0000002550899.18798.103
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.0149capra_hircusENSCHIP0000000040098.64596.8835
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321697.5577marmota_marmota_marmotaENSMMMP0000001040899.052897.2936
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996070.69270.0136procavia_capensisENSPCAP0000000904884.991884.1762
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.557795.1153mus_caroliMGP_CAROLIEiJ_P002313497.956495.5041
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.82995.9294ictidomys_tridecemlineatusENSSTOP0000002189298.362996.4529
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.964796.4722cavia_porcellusENSCPOP0000000192998.231396.7347
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996090.50290.095saimiri_boliviensis_boliviensisENSSBOP0000000283699.850399.4012
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.557795.3867mus_spicilegusENSMSIP0000003656097.956495.7766
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.643297.0149ovis_aries_rambouilletENSOARP0002001229098.643297.0149
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996077.611976.2551tupaia_belangeriENSTBEP0000000095077.611976.2551
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321697.829canis_lupus_familiarisENSCAFP0084500419199.052897.5643
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.371895.9294cricetulus_griseus_chok1gshdENSCGRP0000102134898.505496.0598
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996087.652680.7327monodelphis_domesticaENSMODP0000001345886.711479.8658
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.286394.1655ochotona_princepsENSOPRP0000000149397.817294.6794
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996018.181817.3677balaenoptera_musculusENSBMSP0001001925695.035590.7801
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.050297.1506dipodomys_ordiiENSDORP0000000685499.050297.1506
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996044.233443.0122mesocricetus_auratusENSMAUP0000000010996.735994.0653
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996044.233443.0122mesocricetus_auratusENSMAUP0000001125996.735994.0653
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.693495.6581oryctolagus_cuniculusENSOCUP0000001836897.959295.9184
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996084.938981.9539aotus_nancymaaeENSANAP0000000227790.724687.5362
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996087.51779.3758phascolarctos_cinereusENSPCIP0000002111686.461178.4182
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.185997.2863bos_grunniensENSBGRP0000001666399.185997.2863
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321698.2361panthera_leoENSPLOP0000002397299.052897.9702
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.185997.2863bos_taurusENSBTAP0000002200299.185997.2863
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321697.829canis_lupus_dingoENSCAFP0002003345799.052897.5643
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996072.455969.6065propithecus_coquereliENSPCOP0000000430089.747986.2185
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.6934moschus_moschiferusENSMMSP0000003117598.64597.561
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.6934phocoena_sinusENSPSNP0000002586098.245697.166
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996077.476376.1194pteropus_vampyrusENSPVAP0000000896877.581576.2228
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.693495.7938heterocephalus_glaber_femaleENSHGLP0000001879797.693495.7938
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.914597.6934ursus_americanusENSUAMP0000001462098.780597.561
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996089.959389.4166equus_asinusENSEASP0000502287398.660798.0655
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.557794.844jaculus_jaculusENSJJAP0000002448397.690294.9728
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996076.255173.8128jaculus_jaculusENSJJAP0000001834291.382188.4553
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321698.2361prolemur_simusENSPSMP0000001331599.321698.2361
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321698.2361panthera_tigris_altaicaENSPTIP0000000659799.18798.103
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.914597.6934ursus_maritimusENSUMAP0000001027898.646897.429
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996087.245678.9688vombatus_ursinusENSVURP0001001987082.967775.0968
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321698.1004sciurus_vulgarisENSSVLP0000500502999.18797.9675
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.914598.1004loxodonta_africanaENSLAFP0000000519299.318898.5014
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996090.773489.5522delphinapterus_leucasENSDLEP0000001200798.382497.0588
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.693495.1153rattus_norvegicusENSRNOP0000009750798.092695.5041
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.507597.1506vicugna_pacosENSVPAP0000000057998.507597.1506
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996090.50289.1452bos_indicus_hybridENSBIXP0000501485799.25697.7679
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.82995.6581mus_pahariMGP_PahariEiJ_P008630598.228996.049
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996095.522492.1303peromyscus_maniculatus_bairdiiENSPEMP0000003314595.006791.6329
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.185997.2863bison_bison_bisonENSBBBP0000002721899.185997.2863
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.592998.2361carlito_syrichtaENSTSYP0000000384599.592998.2361
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996081.818278.5617cebus_imitatorENSCCAP0000002555491.087687.4622
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.507596.3365octodon_degusENSODEP0000001976898.641396.4674
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.050297.6934neovison_visonENSNVIP0000001592498.782197.429
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.507596.7436nannospalax_galiliENSNGAP0000000363598.775597.0068
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996096.607994.5726sus_scrofaENSSSCP0000001092498.478696.4039
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.643297.422camelus_dromedariusENSCDRP0000502572998.509597.29
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996086.702985.2103mustela_putorius_furoENSMPUP0000000455498.611196.9136
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996092.130391.0448tursiops_truncatusENSTTRP0000001177892.255491.1685
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.321698.2361felis_catusENSFCAP0000002397199.052897.9702
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.1506physeter_catodonENSPCTP0000500894198.64597.019
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.693495.5224mus_spretusMGP_SPRETEiJ_P002427998.092695.9128
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996091.180588.8738catagonus_wagneriENSCWAP0000002880097.674495.2035
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996091.994690.6377microcebus_murinusENSMICP0000001597399.267997.8038
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996083.582181.8182sorex_araneusENSSARP0000001224383.923782.1526
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.6934chinchilla_lanigeraENSCLAP0000001892098.91397.8261
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996073.812869.4708chinchilla_lanigeraENSCLAP0000000268690.515885.1913
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996045.590244.5047chinchilla_lanigeraENSCLAP0000000214090.56688.4097
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.236196.2008myotis_lucifugusENSMLUP0000001604198.772296.7258
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.100495.7938microtus_ochrogasterENSMOCP0000000213197.967595.664
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996098.778897.5577monodon_monocerosENSMMNP0001502442698.378497.1622
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.457398.2361otolemur_garnettiiENSOGAP0000000164299.457398.2361
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996010099.5929chlorocebus_sabaeusENSCSAP0000000393610099.5929
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996097.693495.5224mus_musculusENSMUSP0000002027098.092695.9128
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.864399.3216rhinopithecus_roxellanaENSRROP0000001601099.864399.3216
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996099.185997.2863bos_mutusENSBMUP0000003025199.185997.2863
ENSPTRG00000002562pan_troglodytesENSPTRP0000005996072.048857.9376oryzias_javanicusENSOJAP0000004438868.339854.955

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression