RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPTIG00000011041	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3827 bases	Strand	Plus strand
Position	KE721966.1 : 2297951 - 2301777	RNA binding domain	Endonuclease_5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPTIP00000010208	Endonuclease_5	PF04493	6.8e-13	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPTIT00000014156	255	85aa	ENSPTIP00000010208

Gene Model

Click here to download ENSPTIG00000011041's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPTIG00000011041's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPTIG00000011041

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	70.2381	60.7143	macaca_mulatta	ENSMMUP00000001720	50.4273	43.5897
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	44.0476	36.9048	salmo_salar	ENSSSAP00000152988	20.7865	17.4157
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	52.381	35.7143	neolamprologus_brichardi	ENSNBRP00000023094	59.4595	40.5405
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	53.5714	40.4762	naja_naja	ENSNNAP00000000860	48.3871	36.5591
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	48.8095	38.0952	hucho_hucho	ENSHHUP00000021235	16.9421	13.2231
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	59.5238	48.8095	amphiprion_percula	ENSAPEP00000019354	34.7222	28.4722
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	59.5238	47.619	pundamilia_nyererei	ENSPNYP00000003933	40	32
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	54.7619	40.4762	maylandia_zebra	ENSMZEP00005015822	48.4211	35.7895
ENSPTIG00000011041	panthera_tigris_altaica	ENSPTIP00000010208	50	36.9048	chelonoidis_abingdonii	ENSCABP00000018888	39.2523	28.972

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression