| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSPTIG00000001480 | Gene ID |
|
Accession |
- |
| Symbol |
PABPC5 |
Alias |
- |
Full Name |
poly(A) binding protein cytoplasmic 5 |
| Status |
Confidence |
Length |
1149 bases |
Strand |
Plus strand |
| Position |
KE721825.1 : 1138418 - 1139566 |
RNA binding domain |
RRM_5 , RRM_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSPTIP00000000568 |
RRM_5 |
PF13893 |
1.5e-10 |
1 |
| ENSPTIP00000000568 |
RRM_1 |
PF00076 |
5.2e-79 |
2 |
| ENSPTIP00000000568 |
RRM_1 |
PF00076 |
5.2e-79 |
3 |
| ENSPTIP00000000568 |
RRM_1 |
PF00076 |
5.2e-79 |
4 |
| ENSPTIP00000000568 |
RRM_1 |
PF00076 |
5.2e-79 |
5 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| PABPC5-201 |
ENSPTIT00000001586 |
1149 |
382aa |
ENSPTIP00000000568 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000018731 | 5.23169 | 3.28849 | panthera_tigris_altaica | ENSPTIP00000000568 | 9.1623 | 5.75916 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000018760 | 27.8607 | 14.9254 | panthera_tigris_altaica | ENSPTIP00000000568 | 29.3194 | 15.7068 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000008480 | 15.9483 | 8.18966 | panthera_tigris_altaica | ENSPTIP00000000568 | 29.0576 | 14.9215 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000025495 | 28.8177 | 16.2562 | panthera_tigris_altaica | ENSPTIP00000000568 | 30.6283 | 17.2775 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000011083 | 24.6512 | 13.4884 | panthera_tigris_altaica | ENSPTIP00000000568 | 27.7487 | 15.1832 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000003973 | 47.4295 | 36.9818 | panthera_tigris_altaica | ENSPTIP00000000568 | 74.8691 | 58.377 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000010739 | 23.43 | 11.8357 | panthera_tigris_altaica | ENSPTIP00000000568 | 25.3927 | 12.8272 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000016029 | 30.0366 | 15.3846 | panthera_tigris_altaica | ENSPTIP00000000568 | 21.466 | 10.9948 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000014066 | 29.4479 | 15.0307 | panthera_tigris_altaica | ENSPTIP00000000568 | 25.1309 | 12.8272 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000016855 | 22.956 | 12.1069 | panthera_tigris_altaica | ENSPTIP00000000568 | 38.2199 | 20.1571 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000014388 | 26.1566 | 13.7011 | panthera_tigris_altaica | ENSPTIP00000000568 | 38.4817 | 20.1571 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000014086 | 30.086 | 15.7593 | panthera_tigris_altaica | ENSPTIP00000000568 | 27.4869 | 14.3979 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000002712 | 28.7918 | 15.4242 | panthera_tigris_altaica | ENSPTIP00000000568 | 29.3194 | 15.7068 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000002960 | 46.3636 | 37.8788 | panthera_tigris_altaica | ENSPTIP00000000568 | 80.1047 | 65.445 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000008858 | 78.6487 | 62.7027 | panthera_tigris_altaica | ENSPTIP00000000568 | 76.178 | 60.733 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000010999 | 27.9176 | 15.5606 | panthera_tigris_altaica | ENSPTIP00000000568 | 31.9372 | 17.801 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000020474 | 28.7469 | 16.2162 | panthera_tigris_altaica | ENSPTIP00000000568 | 30.6283 | 17.2775 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000015462 | 22.6415 | 12.7358 | panthera_tigris_altaica | ENSPTIP00000000568 | 25.1309 | 14.1361 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000013847 | 29.5918 | 16.3265 | panthera_tigris_altaica | ENSPTIP00000000568 | 7.59162 | 4.18848 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000025257 | 39.6226 | 31.6038 | panthera_tigris_altaica | ENSPTIP00000000568 | 65.9686 | 52.6178 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000025564 | 22.1987 | 12.0507 | panthera_tigris_altaica | ENSPTIP00000000568 | 27.4869 | 14.9215 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 81.9372 | 78.534 | echinops_telfairi | ENSETEP00000009598 | 81.7232 | 78.329 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.3351 | callithrix_jacchus | ENSCJAP00000045701 | 98.6911 | 96.3351 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | cercocebus_atys | ENSCATP00000040974 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | macaca_nemestrina | ENSMNEP00000028328 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | papio_anubis | ENSPANP00000015087 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | mandrillus_leucophaeus | ENSMLEP00000008288 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | gorilla_gorilla | ENSGGOP00000027578 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.5969 | pan_paniscus | ENSPPAP00000001627 | 98.6911 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | pan_troglodytes | ENSPTRP00000056253 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | pongo_abelii | ENSPPYP00000022977 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | homo_sapiens | ENSP00000308012 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 99.4764 | canis_lupus_familiaris | ENSCAFP00845036017 | 99.7382 | 99.4764 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 99.4764 | vulpes_vulpes | ENSVVUP00000017906 | 99.7382 | 99.4764 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 99.2147 | ursus_americanus | ENSUAMP00000017175 | 99.7382 | 99.2147 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 99.2147 | ailuropoda_melanoleuca | ENSAMEP00000021168 | 99.7382 | 99.2147 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 98.6911 | mustela_putorius_furo | ENSMPUP00000018347 | 99.7382 | 98.6911 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 100 | 100 | panthera_leo | ENSPLOP00000021851 | 100 | 100 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 100 | 100 | panthera_pardus | ENSPPRP00000019360 | 100 | 100 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.9058 | delphinapterus_leucas | ENSDLEP00000003390 | 99.4764 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.9058 | balaenoptera_musculus | ENSBMSP00010024562 | 99.4764 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 97.9058 | physeter_catodon | ENSPCTP00005026974 | 99.7382 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 70.6806 | 69.6335 | procavia_capensis | ENSPCAP00000014501 | 98.1818 | 96.7273 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.9529 | 97.9058 | equus_caballus | ENSECAP00000002349 | 98.9529 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 97.3822 | sus_scrofa | ENSSSCP00000049719 | 99.2147 | 97.3822 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 97.3822 | camelus_dromedarius | ENSCDRP00005031342 | 99.2147 | 97.3822 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 96.5969 | bos_taurus | ENSBTAP00000026566 | 99.2147 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.9529 | 96.8586 | ovis_aries_rambouillet | ENSOARP00020025474 | 98.9529 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.9529 | 96.5969 | capra_hircus | ENSCHIP00000020306 | 98.9529 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 57.0681 | 56.2827 | ochotona_princeps | ENSOPRP00000000777 | 98.6425 | 97.2851 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | oryctolagus_cuniculus | ENSOCUP00000009396 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.9529 | 97.644 | marmota_marmota_marmota | ENSMMMP00000003779 | 98.9529 | 97.644 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.9058 | urocitellus_parryii | ENSUPAP00010027690 | 99.4764 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.3822 | 92.9319 | mus_caroli | MGP_CAROLIEiJ_P0092588 | 97.6378 | 93.1758 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.644 | 93.9791 | mus_pahari | MGP_PahariEiJ_P0090201 | 97.644 | 93.9791 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.3822 | 93.4555 | mus_spretus | MGP_SPRETEiJ_P0096351 | 97.6378 | 93.7008 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.3822 | 93.4555 | mus_musculus | ENSMUSP00000047756 | 97.6378 | 93.7008 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.1675 | 93.7173 | cavia_porcellus | ENSCPOP00000015189 | 98.1675 | 93.7173 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.9058 | 93.9791 | rattus_norvegicus | ENSRNOP00000004462 | 97.9058 | 93.9791 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.3822 | 93.4555 | mus_spicilegus | ENSMSIP00000001660 | 97.6378 | 93.7008 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.644 | 94.7644 | heterocephalus_glaber_female | ENSHGLP00000050132 | 97.644 | 94.7644 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 96.5969 | bos_indicus_hybrid | ENSBIXP00005009616 | 99.2147 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 96.5969 | bos_grunniens | ENSBGRP00000042032 | 99.2147 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.9058 | 96.0733 | microcebus_murinus | ENSMICP00000049705 | 97.9058 | 96.0733 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 97.3822 | vicugna_pacos | ENSVPAP00000000979 | 99.2147 | 97.3822 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 98.9529 | ursus_maritimus | ENSUMAP00000033199 | 99.7382 | 98.9529 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.1675 | 95.0262 | chinchilla_lanigera | ENSCLAP00000000831 | 98.1675 | 95.0262 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.4293 | 96.3351 | otolemur_garnettii | ENSOGAP00000006158 | 98.4293 | 96.3351 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | aotus_nancymaae | ENSANAP00000000627 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 97.644 | tupaia_belangeri | ENSTBEP00000014310 | 99.2147 | 97.644 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.9058 | monodon_monoceros | ENSMMNP00015013492 | 99.4764 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | saimiri_boliviensis_boliviensis | ENSSBOP00000001667 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.9058 | phocoena_sinus | ENSPSNP00000023927 | 99.4764 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.3822 | 94.5026 | sorex_araneus | ENSSARP00000012664 | 97.3822 | 94.5026 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 98.1675 | sciurus_vulgaris | ENSSVLP00005029184 | 98.4456 | 97.1503 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 56.2827 | 54.1885 | bison_bison_bison | ENSBBBP00000011725 | 98.6239 | 94.9541 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.9058 | catagonus_wagneri | ENSCWAP00000017913 | 99.4764 | 97.9058 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.3351 | myotis_lucifugus | ENSMLUP00000016820 | 98.6911 | 96.3351 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | nomascus_leucogenys | ENSNLEP00000027296 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 96.8586 | rhinolophus_ferrumequinum | ENSRFEP00010007091 | 99.2147 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 56.0209 | 54.712 | jaculus_jaculus | ENSJJAP00000007578 | 98.1651 | 95.8716 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.9529 | 96.8586 | moschus_moschiferus | ENSMMSP00000012059 | 98.9529 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | rhinopithecus_roxellana | ENSRROP00000025945 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.2147 | 96.5969 | bos_mutus | ENSBMUP00000013645 | 99.2147 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.4764 | 97.644 | pteropus_vampyrus | ENSPVAP00000006108 | 99.4764 | 97.644 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | chlorocebus_sabaeus | ENSCSAP00000017926 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.3351 | cervus_hanglu_yarkandensis | ENSCHYP00000029516 | 98.6911 | 96.3351 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | rhinopithecus_bieti | ENSRBIP00000002378 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 56.2827 | 54.1885 | nannospalax_galili | ENSNGAP00000003671 | 98.6239 | 94.9541 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.4293 | 96.8586 | propithecus_coquereli | ENSPCOP00000000283 | 98.4293 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 99.7382 | 98.9529 | neovison_vison | ENSNVIP00000018215 | 99.7382 | 98.9529 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.9058 | 95.288 | microtus_ochrogaster | ENSMOCP00000001991 | 97.9058 | 95.288 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.6911 | 96.8586 | cebus_imitator | ENSCCAP00000028388 | 98.6911 | 96.8586 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 97.644 | 94.2408 | peromyscus_maniculatus_bairdii | ENSPEMP00000000227 | 97.644 | 94.2408 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.4293 | 96.5969 | carlito_syrichta | ENSTSYP00000024525 | 98.4293 | 96.5969 |
| ENSPTIG00000001480 | panthera_tigris_altaica | ENSPTIP00000000568 | 98.4293 | 96.5969 | prolemur_simus | ENSPSMP00000033413 | 98.4293 | 96.5969 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
