Description

Ensembl ID ENSPTEG00000037972 Gene ID 111546352 Accession -
Symbol Alias - Full Name UPF3A regulator of nonsense mediated mRNA decay
Status Confidence Length 23107 bases Strand Plus strand
Position PDMG02000265.1 : 1323400 - 1346506 RNA binding domain Smg4_UPF3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPTEP00000041457 Smg4_UPF3 PF03467 4.8e-51 1
ENSPTEP00000041459 Smg4_UPF3 PF03467 4.1e-28 1
ENSPTEP00000041459 Smg4_UPF3 PF03467 4.1e-28 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPTET00000055378 1392 463aa ENSPTEP00000041457
- ENSPTET00000055380 1293 430aa ENSPTEP00000041459

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTEG00000037972

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPTEG00000037972

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression