Description

Ensembl ID ENSPSNG00000009876 Gene ID 116760854 Accession -
Symbol PRPF40B Alias - Full Name pre-mRNA processing factor 40 homolog B
Status Confidence Length 20331 bases Strand Minus strand
Position 10 : 64043806 - 64064136 RNA binding domain FF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPSNP00000013684 FF PF01846 1e-41 1
ENSPSNP00000013684 FF PF01846 1e-41 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PRPF40B-201 ENSPSNT00000015477 3169 872aa ENSPSNP00000013684

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPSNG00000009876phocoena_sinusENSPSNP0000000823468.353154.0366phocoena_sinusENSPSNP0000001368472.821157.5688

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368463.532156.5367ornithorhynchus_anatinusENSOANP0000003586069.077361.4713
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368491.284486.6973sarcophilus_harrisiiENSSHAP0000002417785.499581.203
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368484.977180.8486notamacropus_eugeniiENSMEUP0000000083787.796283.5308
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368440.71137.5choloepus_hoffmanniENSCHOP0000000427241.617838.3353
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.591795.8716dasypus_novemcinctusENSDNOP0000003345590.821889.2209
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368479.128476.9495erinaceus_europaeusENSEEUP0000000667689.378286.9171
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368464.334962.844echinops_telfairiENSETEP0000001580065.61464.0936
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.394596.445callithrix_jacchusENSCJAP0000003908698.281896.3345
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.445macaca_fascicularisENSMFAP0000002160298.277896.5557
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.445cercocebus_atysENSCATP0000001710098.277896.5557
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.935896.3303macaca_mulattaENSMMUP0000005737595.739994.1704
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.050596.3303macaca_nemestrinaENSMNEP0000001894495.85294.1704
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.445papio_anubisENSPANP0000000231498.277896.5557
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.279896.445mandrillus_leucophaeusENSMLEP0000003972998.392796.5557
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.1009gorilla_gorillaENSGGOP0000000155695.964193.9462
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.559694.6101pan_paniscusENSPPAP0000001034094.500692.5926
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.279896.5596pan_troglodytesENSPTRP0000005023698.392796.6705
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368491.169789.2202pongo_abeliiENSPPYP0000000512785.760583.9266
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.445homo_sapiensENSP0000044807395.964194.2825
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.738596.789canis_lupus_familiarisENSCAFP0084502684986.359184.654
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368489.908387.6147vulpes_vulpesENSVVUP0000002977388.788286.5232
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.738596.6743ailuropoda_melanoleucaENSAMEP0000000101896.63394.6128
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368419.839418.2339ursus_americanusENSUAMP0000002080362.230257.1942
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.623996.6743mustela_putorius_furoENSMPUP0000001446798.623996.6743
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368488.188186.1239felis_catusENSFCAP0000004922685.066483.0752
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.445panthera_pardusENSPPRP0000001682196.61494.921
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.5596panthera_leoENSPLOP0000001792496.61495.0339
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368499.770699.7706tursiops_truncatusENSTTRP0000001119299.770699.7706
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368499.197399.0826physeter_catodonENSPCTP0000501142296.864596.7525
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368499.082699.0826delphinapterus_leucasENSDLEP0000002251599.769199.7691
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368499.082698.9679balaenoptera_musculusENSBMSP0001002535596.752596.6405
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.674394.2661loxodonta_africanaENSLAFP0000001230696.785394.3743
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368493.119391.9725equus_asinusENSEASP0000500153995.867894.6871
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.623997.3624equus_caballusENSECAP0000001867194.401893.1943
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368481.766180.0459procavia_capensisENSPCAP0000001248881.672479.9542
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.935896.9037sus_scrofaENSSSCP0000000021598.500697.4625
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.821196.6743capra_hircusENSCHIP0000002852398.612797.4566
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.509297.3624camelus_dromedariusENSCDRP0000500806281.267780.3217
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.279897.0183bos_taurusENSBTAP0000005756789.363988.2169
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368494.954191.2844ochotona_princepsENSOPRP0000000422194.845491.1798
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.623997.3624ovis_aries_rambouilletENSOARP0002000069798.623997.3624
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.935895.9862marmota_marmota_marmotaENSMMMP0000002638897.695.6571
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368495.527593.0046urocitellus_parryiiENSUPAP0001001201295.637293.1114
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368493.233989.7936oryctolagus_cuniculusENSOCUP0000004406877.354974.5005
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.674394.3807dipodomys_ordiiENSDORP0000000025096.896694.5977
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.362494.6101cricetulus_griseus_chok1gshdENSCGRP0000100499694.860392.1788
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.477194.6101mesocricetus_auratusENSMAUP0000001206896.921394.0707
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.903793.8073mus_caroliMGP_CAROLIEiJ_P003974796.792793.6999
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.903793.578mus_pahariMGP_PahariEiJ_P004309896.792793.4708
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.018393.8073mus_spicilegusENSMSIP0000000339197.353394.1312
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.903793.6927mus_spretusMGP_SPRETEiJ_P004158196.792793.5853
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.018393.8073mus_musculusENSMUSP0000011586996.907293.6999
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.78993.578rattus_norvegicusENSRNOP0000008066694.831591.6854
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368415.596315.367octodon_degusENSODEP0000001477610098.5294
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.78994.4954heterocephalus_glaber_femaleENSHGLP0000000563994.091491.8618
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.247794.9541cavia_porcellusENSCPOP0000002221895.280993.0337
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368493.348691.055ursus_maritimusENSUMAP0000000897390.14487.9291
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.738597.7064bos_grunniensENSBGRP0000000327796.416695.4087
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368490.71186.3532vombatus_ursinusENSVURP0001000870188.577884.3225
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.78995.5275bos_indicus_hybridENSBIXP0000503735491.144789.9568
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.706495.7569otolemur_garnettiiENSOGAP0000000458897.594595.6472
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.3303microcebus_murinusENSMICP0000003190395.642593.8548
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.674394.3807chinchilla_lanigeraENSCLAP0000000229797.456695.1445
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368488.302783.8303phascolarctos_cinereusENSPCIP0000003636787.583.0682
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.1009ictidomys_tridecemlineatusENSSTOP0000002906293.756891.7853
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.362496.9037monodon_monocerosENSMMNP0001501876578.75778.3859
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.559694.6101myotis_lucifugusENSMLUP0000000582494.926793.0101
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.165196.789catagonus_wagneriENSCWAP0000002414595.749494.4072
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.738597.7064bison_bison_bisonENSBBBP0000001539496.416695.4087
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368494.495492.4312tupaia_belangeriENSTBEP0000000627094.387292.3253
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368490.022988.0734panthera_tigris_altaicaENSPTIP0000001516497.273995.1673
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.394596.6743saimiri_boliviensis_boliviensisENSSBOP0000001808698.281896.5636
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.509296.5596aotus_nancymaaeENSANAP0000002429496.08594.1834
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.706495.9862prolemur_simusENSPSMP0000002565795.30293.6242
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368459.403757.3395sorex_araneusENSSARP0000001083166.838764.5161
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368450.458749.8853sorex_araneusENSSARP0000001177096.703395.6044
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368495.068893.3486rhinopithecus_bietiENSRBIP0000001186093.146191.4607
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.706495.7569rhinolophus_ferrumequinumENSRFEP0001001907595.730393.8202
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368493.92292.3165pteropus_vampyrusENSPVAP0000001497394.572792.9561
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368476.834973.8532nomascus_leucogenysENSNLEP0000002365891.906788.3402
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.903794.1514microtus_ochrogasterENSMOCP0000000114096.681993.9359
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.935896.3303rhinopithecus_roxellanaENSRROP0000002877395.739994.1704
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.394596.5596cebus_imitatorENSCCAP0000002472398.281896.449
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.935895.8716sciurus_vulgarisENSSVLP0000501978895.632793.617
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.018393.6927peromyscus_maniculatus_bairdiiENSPEMP0000001703196.465293.1585
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.279897.0183moschus_moschiferusENSMMSP0000002026898.279897.0183
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.050596.3303propithecus_coquereliENSPCOP0000002999195.637693.9597
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.330393.4633nannospalax_galiliENSNGAP000000205819693.1429
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.903795.7569bos_mutusENSBMUP0000003140898.830497.6608
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368495.756993.2339jaculus_jaculusENSJJAP0000001152696.980394.4251
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368497.935895.9862neovison_visonENSNVIP0000000797390.370488.5714
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368494.724891.9725canis_lupus_dingoENSCAFP0002001706095.27192.5029
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368496.330394.8394carlito_syrichtaENSTSYP0000001250593.959792.5056
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368498.050596.2156chlorocebus_sabaeusENSCSAP0000000236695.85294.0583
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368446.559629.5872caenorhabditis_elegansZK1098.1a.156.077335.6354
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368455.160539.2202drosophila_melanogasterFBpp007733359.677442.4318
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368455.389940.711ciona_intestinalisENSCINP0000001682659.263843.5583
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368473.394558.4862petromyzon_marinusENSPMAP0000000335772.072157.4324
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368445.642237.0413eptatretus_burgeriENSEBUP0000000554973.027559.2661
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368475.573463.7615latimeria_chalumnaeENSLACP0000002175973.713662.1924
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368465.825758.0275chrysemys_picta_belliiENSCPBP0000002778871.127662.7014
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368469.954161.3532crocodylus_porosusENSCPRP0000500266973.405564.3803
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368430.045926.2615sphenodon_punctatusENSSPUP0000002127079.878169.8171
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368477.752365.2523xenopus_tropicalisENSXETP0000007048972.513460.8556
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368455.733948.3945notechis_scutatusENSNSUP0000002528483.937872.8843
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368454.472547.7064pseudonaja_textilisENSPTXP0000000861681.475171.3551
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368455.045944.7248erpetoichthys_calabaricusENSECRP0000001619367.892555.1627
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368455.275248.6239anolis_carolinensisENSACAP0000002678776.996867.7316
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368454.243147.9358naja_najaENSNNAP0000001370683.421573.7213
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368475.573464.5642salvator_merianaeENSSMRP0000001182374.886463.9773
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368475.34466.3991gopherus_evgoodeiENSGEVP0000501347375.866166.8591
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368464.220255.8486chelonoidis_abingdoniiENSCABP0000001202665.9657.3616
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368455.848649.1972podarcis_muralisENSPMRP0000003436982.542472.7119
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368430.848616.055saccharomyces_cerevisiaeYKL012W46.140724.0137
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368469.036757.3395leptobrachium_leishanenseENSLLEP0000000686864.940753.9374
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368464.220256.422terrapene_carolina_triunguisENSTMTP0000003048771.156362.5159
ENSPSNG00000009876phocoena_sinusENSPSNP0000001368414.678910.5505ciona_savignyiENSCSAVP0000001383667.015748.1675

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression