RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPSNG00000009723	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	501 bases	Strand	Minus strand
Position	11 : 52042124 - 52042624	RNA binding domain	S10_plectin
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPSNP00000013130	S10_plectin	PF03501	2.6e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPSNT00000014860	501	166aa	ENSPSNP00000013130

Gene Model

Click here to download ENSPSNG00000009723's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPSNG00000009723's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000021545	68.4848	61.8182	phocoena_sinus	ENSPSNP00000013130	68.0723	61.4458

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	56.0241	52.4096	choloepus_hoffmanni	ENSCHOP00000007565	87.7358	82.0755
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	48.1928	39.1566	panthera_pardus	ENSPPRP00000023133	61.0687	49.6183
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.6747	62.0482	loxodonta_africana	ENSLAFP00000007170	69.0909	62.4242
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	55.4217	sus_scrofa	ENSSSCP00000060454	64.8485	55.7576
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	30.7229	28.9157	rattus_norvegicus	ENSRNOP00000040086	33.7748	31.7881
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	40.3614	34.3373	heterocephalus_glaber_female	ENSHGLP00000058133	76.1364	64.7727
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	28.9157	25.3012	ursus_maritimus	ENSUMAP00000020080	32	28
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	56.6265	53.012	vicugna_pacos	ENSVPAP00000010621	87.8505	82.243
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	62.6506	55.4217	myotis_lucifugus	ENSMLUP00000016990	62.2754	55.0898
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	52.4096	42.7711	panthera_tigris_altaica	ENSPTIP00000025387	56.129	45.8064
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	56.6265	53.012	pteropus_vampyrus	ENSPVAP00000001522	87.8505	82.243
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.253	54.8193	petromyzon_marinus	ENSPMAP00000010174	63.6364	55.1515
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	60.8434	50	eptatretus_burgeri	ENSEBUP00000026027	63.522	52.2013
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	57.8313	callorhinchus_milii	ENSCMIP00000042220	55.5556	48.4848
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	67.4699	60.241	latimeria_chalumnae	ENSLACP00000019580	63.6364	56.8182
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	58.4337	lepisosteus_oculatus	ENSLOCP00000012179	55.6122	49.4898
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	clupea_harengus	ENSCHAP00000011797	59.5628	52.459
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	danio_rerio	ENSDARP00000045900	64.4578	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	56.6265	carassius_auratus	ENSCARP00000035089	61.4943	54.023
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	carassius_auratus	ENSCARP00000106957	65.0602	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.8313	carassius_auratus	ENSCARP00000066671	47.7876	42.4779
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	astyanax_mexicanus	ENSAMXP00000049898	65.0602	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	ictalurus_punctatus	ENSIPUP00000037154	65.0602	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	56.0241	esox_lucius	ENSELUP00000040179	62.2093	54.0698
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	56.6265	electrophorus_electricus	ENSEEEP00000014416	56.9892	50.5376
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	59.0361	52.4096	oncorhynchus_kisutch	ENSOKIP00005089014	60.8696	54.0373
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	48.7952	41.5663	oncorhynchus_mykiss	ENSOMYP00000092249	56.25	47.9167
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.8313	salmo_salar	ENSSSAP00000013658	45.3782	40.3361
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	salmo_salar	ENSSSAP00000175893	42.8571	37.6984
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	55.4217	salmo_salar	ENSSSAP00000121341	57.9235	50.2732
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	salmo_salar	ENSSSAP00000030153	63.3721	55.814
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	salmo_trutta	ENSSTUP00000087032	47.5771	41.8502
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	55.4217	salmo_trutta	ENSSTUP00000043587	57.9235	50.2732
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	62.6506	54.2169	salmo_trutta	ENSSTUP00000076403	57.1429	49.4506
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.8313	salmo_trutta	ENSSTUP00000060391	63.1579	56.1404
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	56.0241	gadus_morhua	ENSGMOP00000026453	50.4762	44.2857
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	fundulus_heteroclitus	ENSFHEP00000031093	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	poecilia_reticulata	ENSPREP00000019120	53.4314	47.0588
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	xiphophorus_maculatus	ENSXMAP00000024573	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	oryzias_latipes	ENSORLP00000028940	53.4653	47.0297
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.8675	59.0361	cyclopterus_lumpus	ENSCLMP00005035889	55.7789	49.2462
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	oreochromis_niloticus	ENSONIP00000018563	64.881	57.1429
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	56.0241	haplochromis_burtoni	ENSHBUP00000010031	61.1429	53.1429
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	astatotilapia_calliptera	ENSACLP00000001035	64.881	57.1429
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.253	55.4217	sparus_aurata	ENSSAUP00010065879	60.6936	53.1792
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	59.0361	51.2048	chrysemys_picta_bellii	ENSCPBP00000025239	44.7489	38.8128
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.0723	61.4458	chrysemys_picta_bellii	ENSCPBP00000039384	54.067	48.8038
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	56.0241	lates_calcarifer	ENSLCAP00010021018	56.6138	49.2063
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	60.8434	sphenodon_punctatus	ENSSPUP00000003342	70.3226	65.1613
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	58.4337	laticauda_laticaudata	ENSLLTP00000005274	53.6585	47.3171
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.6747	60.241	xenopus_tropicalis	ENSXETP00000033121	62.2951	54.6448
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.0723	61.4458	gallus_gallus	ENSGALP00010039306	68.4848	61.8182
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	anas_platyrhynchos_platyrhynchos	ENSAPLP00000029768	54.5918	48.9796
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	serinus_canaria	ENSSCAP00000022230	68.1529	61.1465
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.0723	61.4458	parus_major	ENSPMJP00000016555	42.9658	38.7833
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	meleagris_gallopavo	ENSMGAP00000018740	66.4596	59.6273
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	dicentrarchus_labrax	ENSDLAP00005011976	46.1864	40.678
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	58.4337	erpetoichthys_calabaricus	ENSECRP00000004663	64.881	57.7381
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	59.6386	pelodiscus_sinensis	ENSPSIP00000005162	69.9346	64.7059
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	cyprinodon_variegatus	ENSCVAP00000012035	65.0602	57.2289
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	oryzias_melastigma	ENSOMEP00000028899	65.0602	57.2289
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	neolamprologus_brichardi	ENSNBRP00000011631	64.881	57.1429
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	54.8193	takifugu_rubripes	ENSTRUP00000084721	48.4018	41.5525
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	kryptolebias_marmoratus	ENSKMAP00000021908	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	poecilia_formosa	ENSPFOP00000015135	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	seriola_dumerili	ENSSDUP00000026166	61.236	53.9326
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	58.4337	cottoperca_gobio	ENSCGOP00000002524	66.2651	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	58.4337	sander_lucioperca	ENSSLUP00000055945	66.2651	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.2289	tetraodon_nigroviridis	ENSTNIP00000021477	65.6627	57.2289
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.8313	pygocentrus_nattereri	ENSPNAP00000006671	65.0602	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	57.8313	acanthochromis_polyacanthus	ENSAPOP00000007963	66.2651	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	59.6386	51.8072	cynoglossus_semilaevis	ENSCSEP00000026471	63.871	55.4839
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	61.4458	52.4096	larimichthys_crocea	ENSLCRP00005055677	55.4348	47.2826
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	seriola_lalandi_dorsalis	ENSSLDP00000006441	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	58.4337	amphiprion_percula	ENSAPEP00000032535	66.2651	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	labrus_bergylta	ENSLBEP00000031800	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	67.4699	60.8434	taeniopygia_guttata	ENSTGUP00000001840	40	36.0714
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	struthio_camelus_australis	ENSSCUP00000008178	62.2093	55.814
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	maylandia_zebra	ENSMZEP00005002915	57.3684	50.5263
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	myripristis_murdjan	ENSMMDP00005002094	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	57.2289	chelonoidis_abingdonii	ENSCABP00000008304	67.5159	60.5096
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	poecilia_latipinna	ENSPLAP00000025397	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	55.4217	oryzias_javanicus	ENSOJAP00000007319	61.2717	53.1792
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	55.4217	gasterosteus_aculeatus	ENSGACP00000006518	60.6742	51.6854
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	36.1446	30.7229	paramormyrops_kingsleyae	ENSPKIP00000014411	24.5902	20.9016
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	60.8434	48.7952	mastacembelus_armatus	ENSMAMP00000005829	51.5306	41.3265
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	55.4217	amphilophus_citrinellus	ENSACIP00000013882	61.4943	52.8736
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.0723	61.4458	ficedula_albicollis	ENSFALP00000023060	38.6986	34.9315
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	43.3735	37.9518	stegastes_partitus	ENSSPAP00000001320	37.8947	33.1579
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	56.0241	nothobranchius_furzeri	ENSNFUP00015024391	59.4444	51.6667
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	68.0723	61.4458	strigops_habroptila	ENSSHBP00005016676	60.1064	54.2553
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.8554	55.4217	scophthalmus_maximus	ENSSMAP00000061850	49.7653	43.1925
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	63.253	53.6145	hucho_hucho	ENSHHUP00000047554	55.5556	47.0899
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	58.4337	amphiprion_ocellaris	ENSAOCP00000016345	66.2651	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	62.0482	54.8193	cyprinus_carpio_carpio	ENSCCRP00000038439	55.0802	48.6631
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	cyprinus_carpio_carpio	ENSCCRP00000038435	55.6701	50
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	56.6265	oncorhynchus_tshawytscha	ENSOTSP00005002637	47.1861	40.6926
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	54.8193	48.7952	oncorhynchus_tshawytscha	ENSOTSP00005039605	61.4865	54.7297
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	oncorhynchus_tshawytscha	ENSOTSP00005090180	63.1579	55.5556
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.8313	oncorhynchus_tshawytscha	ENSOTSP00005088184	63.1579	56.1404
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.2289	oryzias_sinensis	ENSOSIP00000027941	53.4653	47.0297
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.8313	betta_splendens	ENSBSLP00000000744	65.6627	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	sinocyclocheilus_grahami	ENSSGRP00000045038	65.0602	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	sinocyclocheilus_grahami	ENSSGRP00000099014	55.3846	49.7436
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	57.2289	51.8072	hippocampus_comes	ENSHCOP00000018734	68.8406	62.3188
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	33.1325	24.0964	leptobrachium_leishanense	ENSLLEP00000000584	49.1071	35.7143
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	66.2651	58.4337	leptobrachium_leishanense	ENSLLEP00000006607	67.9012	59.8765
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	56.6265	leptobrachium_leishanense	ENSLLEP00000019866	65.0602	56.6265
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	56.0241	pundamilia_nyererei	ENSPNYP00000006496	60.452	52.5424
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	60.241	53.6145	terrapene_carolina_triunguis	ENSTMTP00000022044	50.5051	44.9495
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	terrapene_carolina_triunguis	ENSTMTP00000015944	68.1529	61.1465
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	57.2289	anabas_testudineus	ENSATEP00000055826	48.6607	42.4107
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.6627	58.4337	denticeps_clupeoides	ENSDCDP00000029725	60.221	53.5912
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	58.4337	scleropages_formosus	ENSSFOP00015078477	65.0602	58.4337
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	65.0602	57.8313	scleropages_formosus	ENSSFOP00015029895	65.0602	57.8313
ENSPSNG00000009723	phocoena_sinus	ENSPSNP00000013130	64.4578	57.8313	aquila_chrysaetos_chrysaetos	ENSACCP00020019795	64.4578	57.8313

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression