RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPSNG00000009132	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	195 bases	Strand	Minus strand
Position	13 : 39160716 - 39160910	RNA binding domain	Ribosomal_S10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPSNP00000012348	Ribosomal_S10	PF00338	4.1e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPSNT00000013976	195	64aa	ENSPSNP00000012348

Gene Model

Click here to download ENSPSNG00000009132's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPSNG00000009132's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000016604	42.6573	39.8601	phocoena_sinus	ENSPSNP00000012348	95.3125	89.0625
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000028187	50.8333	48.3333	phocoena_sinus	ENSPSNP00000012348	95.3125	90.625
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000014767	90.625	87.5	phocoena_sinus	ENSPSNP00000012348	90.625	87.5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	90.625	macaca_mulatta	ENSMMUP00000024256	51.2605	48.7395
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	93.75	87.5	pan_paniscus	ENSPPAP00000004437	93.75	87.5
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	65.625	60.9375	canis_lupus_familiaris	ENSCAFP00845020001	42.4242	39.3939
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	ursus_americanus	ENSUAMP00000034610	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	93.75	89.0625	physeter_catodon	ENSPCTP00005017137	45.8015	43.5115
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	balaenoptera_musculus	ENSBMSP00010016271	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	87.5	82.8125	sus_scrofa	ENSSSCP00000080511	87.5	82.8125
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	92.1875	octodon_degus	ENSODEP00000004331	95.3125	92.1875
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	84.375	76.5625	otolemur_garnettii	ENSOGAP00000008833	45.3782	41.1765
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	81.25	76.5625	ictidomys_tridecemlineatus	ENSSTOP00000026968	46.4286	43.75
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	71.875	70.3125	monodon_monoceros	ENSMMNP00015015854	21.5962	21.1268
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	64.0625	56.25	catagonus_wagneri	ENSCWAP00000017756	41.4141	36.3636
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	saimiri_boliviensis_boliviensis	ENSSBOP00000002389	96.875	92.1875
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	89.0625	cervus_hanglu_yarkandensis	ENSCHYP00000004283	51.2605	47.8992
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	90.625	peromyscus_maniculatus_bairdii	ENSPEMP00000003638	54.955	52.2523
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	89.0625	moschus_moschiferus	ENSMMSP00000021953	51.2605	47.8992
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	89.0625	jaculus_jaculus	ENSJJAP00000005498	95.3125	89.0625
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	65.625	60.9375	canis_lupus_dingo	ENSCAFP00020034374	42.4242	39.3939
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	92.1875	81.25	caenorhabditis_elegans	Y105E8A.16.1	50.4273	44.4444
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	84.375	drosophila_melanogaster	FBpp0083371	50.8333	45
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	92.1875	84.375	ciona_intestinalis	ENSCINP00000001547	46.0938	42.1875
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	90.625	petromyzon_marinus	ENSPMAP00000005542	50.8333	48.3333
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	93.75	89.0625	eptatretus_burgeri	ENSEBUP00000018480	53.5714	50.8929
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	callorhinchus_milii	ENSCMIP00000038698	41.6107	39.5973
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	lepisosteus_oculatus	ENSLOCP00000006538	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	clupea_harengus	ENSCHAP00000027151	57.4074	54.6296
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	carassius_auratus	ENSCARP00000113716	56.3636	53.6364
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	carassius_auratus	ENSCARP00000019372	49.6	47.2
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	astyanax_mexicanus	ENSAMXP00000042426	52.9915	50.4273
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	ictalurus_punctatus	ENSIPUP00000024306	49.6	47.2
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	esox_lucius	ENSELUP00000062835	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	electrophorus_electricus	ENSEEEP00000003252	42.7586	40.6897
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oncorhynchus_kisutch	ENSOKIP00005013202	38.0368	36.1963
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oncorhynchus_mykiss	ENSOMYP00000014693	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	salmo_trutta	ENSSTUP00000052373	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	salmo_trutta	ENSSTUP00000053502	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	gadus_morhua	ENSGMOP00000038743	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	fundulus_heteroclitus	ENSFHEP00000032677	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	poecilia_reticulata	ENSPREP00000013351	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	xiphophorus_maculatus	ENSXMAP00000032285	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	cyclopterus_lumpus	ENSCLMP00005031772	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oreochromis_niloticus	ENSONIP00000061295	39.4904	37.5796
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	sparus_aurata	ENSSAUP00010005457	51.2397	48.7603
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	chrysemys_picta_bellii	ENSCPBP00000006121	46.9697	44.697
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	crocodylus_porosus	ENSCPRP00005023530	51.6667	49.1667
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	lates_calcarifer	ENSLCAP00010056602	51.6667	49.1667
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	laticauda_laticaudata	ENSLLTP00000006691	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	gallus_gallus	ENSGALP00010005591	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	parus_major	ENSPMJP00000021169	50.4065	47.9675
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	90.625	meleagris_gallopavo	ENSMGAP00000011466	51.6949	49.1525
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	dicentrarchus_labrax	ENSDLAP00005044303	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	erpetoichthys_calabaricus	ENSECRP00000007578	51.6667	49.1667
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	pelodiscus_sinensis	ENSPSIP00000020084	52.9915	50.4273
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	cyprinodon_variegatus	ENSCVAP00000031592	96.875	92.1875
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	anolis_carolinensis	ENSACAP00000025409	52.5424	50
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	neolamprologus_brichardi	ENSNBRP00000010965	56.3636	53.6364
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	kryptolebias_marmoratus	ENSKMAP00000005348	33.8798	32.2404
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	poecilia_formosa	ENSPFOP00000012053	33.5135	31.8919
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	seriola_dumerili	ENSSDUP00000007734	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	cottoperca_gobio	ENSCGOP00000005072	34.2541	32.5967
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	coturnix_japonica	ENSCJPP00005012217	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	sander_lucioperca	ENSSLUP00000020060	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	tetraodon_nigroviridis	ENSTNIP00000001041	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	pygocentrus_nattereri	ENSPNAP00000032800	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	acanthochromis_polyacanthus	ENSAPOP00000000710	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	larimichthys_crocea	ENSLCRP00005060267	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	93.75	82.8125	seriola_lalandi_dorsalis	ENSSLDP00000003282	48.7805	43.0894
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	amphiprion_percula	ENSAPEP00000010962	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	geospiza_fortis	ENSGFOP00000004431	52.5424	50
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	salvator_merianae	ENSSMRP00000013256	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	labrus_bergylta	ENSLBEP00000037926	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	taeniopygia_guttata	ENSTGUP00000011438	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	gopherus_evgoodei	ENSGEVP00005000043	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	struthio_camelus_australis	ENSSCUP00000010243	43.662	41.5493
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	maylandia_zebra	ENSMZEP00005033469	54.386	51.7544
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	maylandia_zebra	ENSMZEP00005005123	54.386	51.7544
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	maylandia_zebra	ENSMZEP00005029716	56.3636	53.6364
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	myripristis_murdjan	ENSMMDP00005010496	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	chelonoidis_abingdonii	ENSCABP00000006916	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	poecilia_latipinna	ENSPLAP00000031006	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	gasterosteus_aculeatus	ENSGACP00000002531	49.6	47.2
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	95.3125	90.625	paramormyrops_kingsleyae	ENSPKIP00000029138	45.1852	42.963
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	mastacembelus_armatus	ENSMAMP00000024426	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	81.25	57.8125	saccharomyces_cerevisiae	YHL015W	42.9752	30.5785
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	ficedula_albicollis	ENSFALP00000010727	52.5424	50
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	nothobranchius_furzeri	ENSNFUP00015034434	52.9915	50.4273
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	strigops_habroptila	ENSSHBP00005004394	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	scophthalmus_maximus	ENSSMAP00000047564	31.7949	30.2564
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	hucho_hucho	ENSHHUP00000006333	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	amphiprion_ocellaris	ENSAOCP00000005195	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	cyprinus_carpio_carpio	ENSCCRP00000150026	39.2405	37.3418
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	cyprinus_carpio_carpio	ENSCCRP00000174603	51.6667	49.1667
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oncorhynchus_tshawytscha	ENSOTSP00005005238	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oncorhynchus_tshawytscha	ENSOTSP00005056031	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oncorhynchus_tshawytscha	ENSOTSP00005048534	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	oryzias_sinensis	ENSOSIP00000010720	36.9048	35.119
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	betta_splendens	ENSBSLP00000035232	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	sinocyclocheilus_grahami	ENSSGRP00000005169	96.875	92.1875
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	hippocampus_comes	ENSHCOP00000009280	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	leptobrachium_leishanense	ENSLLEP00000011100	50	47.5806
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	terrapene_carolina_triunguis	ENSTMTP00000019057	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	anabas_testudineus	ENSATEP00000052232	41.8919	39.8649
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	denticeps_clupeoides	ENSDCDP00000011142	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	scleropages_formosus	ENSSFOP00015072098	52.1008	49.5798
ENSPSNG00000009132	phocoena_sinus	ENSPSNP00000012348	96.875	92.1875	aquila_chrysaetos_chrysaetos	ENSACCP00020006093	52.1008	49.5798

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression