Description

Ensembl ID ENSPSNG00000005672 Gene ID 116758221 Accession -
Symbol LSM4 Alias - Full Name U6 snRNA-associated Sm-like protein LSm4
Status Confidence Length 393 bases Strand Plus strand
Position 8 : 56522849 - 56523241 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPSNP00000007687 LSM PF01423 1.3e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
LSM4-201 ENSPSNT00000008719 393 130aa ENSPSNP00000007687

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPSNG00000005672phocoena_sinusENSPSNP0000000419425.541122.9437phocoena_sinusENSPSNP0000000768745.384640.7692
ENSPSNG00000005672phocoena_sinusENSPSNP0000000031123.026313.8158phocoena_sinusENSPSNP0000000768726.923116.1538
ENSPSNG00000005672phocoena_sinusENSPSNP0000002174941.269824.6032phocoena_sinusENSPSNP000000076874023.8462
ENSPSNG00000005672phocoena_sinusENSPSNP0000001407141.176524.3697phocoena_sinusENSPSNP0000000768737.692322.3077
ENSPSNG00000005672phocoena_sinusENSPSNP0000000762036.363619.0909phocoena_sinusENSPSNP0000000768730.769216.1538

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462ornithorhynchus_anatinusENSOANP0000001183976.25969.0648
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307774.6154sarcophilus_harrisiiENSSHAP0000002549876.978469.7842
ENSPSNG00000005672phocoena_sinusENSPSNP000000076877063.8462notamacropus_eugeniiENSMEUP0000001206273.387166.9355
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768771.538566.1538echinops_telfairiENSETEP000000063067569.3548
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231macaca_fascicularisENSMFAP0000001606073.287768.4931
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768776.923173.0769cercocebus_atysENSCATP0000001009043.2941.1255
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231macaca_mulattaENSMMUP0000007986173.287768.4931
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768775.384671.5385macaca_nemestrinaENSMNEP0000004001644.954142.6605
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231papio_anubisENSPANP0000000154576.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768776.923173.0769mandrillus_leucophaeusENSMLEP0000000776243.2941.1255
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768773.846270.7692gorilla_gorillaENSGGOP0000004737640.336138.6555
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768775.384672.3077pan_paniscusENSPPAP0000004300641.176539.4958
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768775.384672.3077pan_troglodytesENSPTRP0000009160341.176539.4958
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231pongo_abeliiENSPPYP0000001090876.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231homo_sapiensENSP0000046946876.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538canis_lupus_familiarisENSCAFP0084503141154.35950.7692
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538vulpes_vulpesENSVVUP0000001101154.35950.7692
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538ursus_americanusENSUAMP0000000071976.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231mustela_putorius_furoENSMPUP0000001547976.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231felis_catusENSFCAP0000004512076.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231panthera_pardusENSPPRP0000002708076.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231panthera_leoENSPLOP0000000011176.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768776.923170physeter_catodonENSPCTP0000501663164.102658.3333
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768796.153893.8462delphinapterus_leucasENSDLEP0000000405697.656295.3125
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231balaenoptera_musculusENSBMSP0001000609976.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768780.769274.6154loxodonta_africanaENSLAFP0000001464075.539669.7842
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768771.538566.1538procavia_capensisENSPCAP000000079167569.3548
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231sus_scrofaENSSSCP0000008096676.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538capra_hircusENSCHIP0000000742670.198765.5629
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231camelus_dromedariusENSCDRP0000501602876.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538bos_taurusENSBTAP0000001131276.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768768.461563.8462ochotona_princepsENSOPRP0000000510774.789969.7479
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231ovis_aries_rambouilletENSOARP0002000608676.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231marmota_marmota_marmotaENSMMMP0000000149876.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768777.692372.3077urocitellus_parryiiENSUPAP0001002353943.722940.6926
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231dipodomys_ordiiENSDORP0000001683176.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768779.230873.0769cricetulus_griseus_chok1gshdENSCGRP0000101324674.637768.8406
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462mus_caroliMGP_CAROLIEiJ_P008482075.362369.5652
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462mus_pahariMGP_PahariEiJ_P004769575.362369.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768779.230873.0769mus_spicilegusENSMSIP0000003850944.782641.3043
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462mus_spretusMGP_SPRETEiJ_P008832475.362369.5652
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462mus_musculusENSMUSP0000003431175.362369.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768771.538563.8462octodon_degusENSODEP0000000601469.40361.9403
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768760.769255.3846octodon_degusENSODEP0000001589674.528367.9245
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538575.3846octodon_degusENSODEP0000002703376.25970.5036
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768770.769263.0769heterocephalus_glaber_femaleENSHGLP0000003216457.861651.5723
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768780.769274.6154cavia_porcellusENSCPOP0000003241975.539669.7842
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768772.307765.3846monodelphis_domesticaENSMODP0000001880875.806468.5484
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538ursus_maritimusENSUMAP0000001203175.714370.7143
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538bos_grunniensENSBGRP0000004185476.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768773.076965.3846vombatus_ursinusENSVURP000100196477668
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231bos_indicus_hybridENSBIXP0000503304776.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768774.615470otolemur_garnettiiENSOGAP0000001598466.438462.3288
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538microcebus_murinusENSMICP0000004379176.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768780.769274.6154chinchilla_lanigeraENSCLAP0000001575375.539669.7842
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307774.6154phascolarctos_cinereusENSPCIP0000004690676.978469.7842
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231ictidomys_tridecemlineatusENSSTOP0000002416576.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768797.692396.1538monodon_monocerosENSMMNP0001502670699.218897.6562
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538myotis_lucifugusENSMLUP0000000365276.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231catagonus_wagneriENSCWAP0000002404376.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231bison_bison_bisonENSBBBP0000002170976.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538panthera_tigris_altaicaENSPTIP0000000358076.811671.7391
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768773.076967.6923saimiri_boliviensis_boliviensisENSSBOP000000112937670.4
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231aotus_nancymaaeENSANAP0000003401176.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538prolemur_simusENSPSMP0000000011776.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768774.615470.7692rhinopithecus_bietiENSRBIP0000000567646.411544.0191
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231rhinolophus_ferrumequinumENSRFEP0001002970076.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231pteropus_vampyrusENSPVAP0000001450476.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462microtus_ochrogasterENSMOCP0000002443375.362369.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768776.923173.0769rhinopithecus_roxellanaENSRROP0000004564243.2941.1255
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768773.846270cervus_hanglu_yarkandensisENSCHYP0000002864755.172452.2989
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231cebus_imitatorENSCCAP0000003681676.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231sciurus_vulgarisENSSVLP0000503254676.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462peromyscus_maniculatus_bairdiiENSPEMP0000000158775.362369.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768783.076977.6923moschus_moschiferusENSMMSP0000002892077.697872.6619
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538propithecus_coquereliENSPCOP0000001616276.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768780.769274.6154nannospalax_galiliENSNGAP0000000593275.539669.7842
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231bos_mutusENSBMUP0000002095176.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878073.8462jaculus_jaculusENSJJAP0000001518274.820169.0648
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231neovison_visonENSNVIP0000002287276.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231canis_lupus_dingoENSCAFP0002001510076.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538576.1538carlito_syrichtaENSTSYP0000002868776.25971.223
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307776.9231chlorocebus_sabaeusENSCSAP0000000167876.978471.9424
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768763.076951.5385caenorhabditis_elegansF32A5.7.166.666754.4715
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768768.461559.2308drosophila_melanogasterFBpp009964257.792250
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768767.692359.2308ciona_intestinalisENSCINP0000002428169.291360.6299
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768776.923164.6154callorhinchus_miliiENSCMIP0000001170967.567656.7568
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768780.769272.3077latimeria_chalumnaeENSLACP000000180037567.1429
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307774.6154chrysemys_picta_belliiENSCPBP0000001765977.536270.2899
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768779.230871.5385laticauda_laticaudataENSLLTP0000001186863.580257.4074
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768773.846266.9231xenopus_tropicalisENSXETP0000005358131.168828.2468
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878072.3077pseudonaja_textilisENSPTXP0000000279074.820167.6259
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462gallus_gallusENSGALP0001004046867.515961.1465
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462anas_platyrhynchos_platyrhynchosENSAPLP0000001895976.811669.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462serinus_canariaENSSCAP0000002187276.811669.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462parus_majorENSPMJP0000001543376.811669.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768764.615459.2308meleagris_gallopavoENSMGAP0000002623561.764756.6176
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462pelodiscus_sinensisENSPSIP0000001377177.372370.073
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878072.3077naja_najaENSNNAP0000001246074.820167.6259
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768776.923168.4615coturnix_japonicaENSCJPP0000501423572.463864.4928
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462geospiza_fortisENSGFOP0000001407976.811669.5652
ENSPSNG00000005672phocoena_sinusENSPSNP000000076878072.3077salvator_merianaeENSSMRP0000002985674.820167.6259
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307774.6154gopherus_evgoodeiENSGEVP0000502711077.536270.2899
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307774.6154chelonoidis_abingdoniiENSCABP0000002215477.536270.2899
ENSPSNG00000005672phocoena_sinusENSPSNP000000076877063.0769podarcis_muralisENSPMRP0000003546072.865.6
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768780.769273.0769anser_brachyrhynchusENSABRP0000002431869.078962.5
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768743.846230saccharomyces_cerevisiaeYER112W30.481320.8556
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462strigops_habroptilaENSSHBP0000502056876.811669.5652
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768778.461571.5385leptobrachium_leishanenseENSLLEP0000000639973.381366.9065
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768782.307774.6154terrapene_carolina_triunguisENSTMTP0000001691077.536270.2899
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768767.692360.7692ciona_savignyiENSCSAVP0000001471570.463.2
ENSPSNG00000005672phocoena_sinusENSPSNP0000000768781.538573.8462aquila_chrysaetos_chrysaetosENSACCP0002000956376.811669.5652

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression