RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPSMG00000001032	Gene ID		Accession	-
Symbol	PAPOLB	Alias	-	Full Name	poly(A) polymerase beta
Status	Confidence	Length	5493 bases	Strand	Plus strand
Position	MPIZ01128525.1 : 4612 - 10104	RNA binding domain	PAP_RNA-bind
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPSMP00000001370	PAP_RNA-bind	PF04926	2.2e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
PAPOLB-201	ENSPSMT00000001580	1797	598aa	ENSPSMP00000001370

Gene Model

Click here to download ENSPSMG00000001032's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPSMG00000001032's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000020273	61.8084	51.6869	prolemur_simus	ENSPSMP00000001370	76.5886	64.0468
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000034708	72.9364	69.0122	prolemur_simus	ENSPSMP00000001370	90.1338	85.2843

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	86.2876	81.1037	dasypus_novemcinctus	ENSDNOP00000025480	74.2446	69.7842
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.3244	44.1472	callithrix_jacchus	ENSCJAP00000073525	92.4837	86.2745
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	87.9599	84.9498	macaca_fascicularis	ENSMFAP00000015743	86.3711	83.4154
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.4615	84.1137	pan_troglodytes	ENSPTRP00000093018	77.0015	73.2169
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.796	84.2809	homo_sapiens	ENSP00000384700	83.3595	79.1209
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	90.1338	86.2876	canis_lupus_familiaris	ENSCAFP00845020126	79.7337	76.3314
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	48.1605	46.4883	vulpes_vulpes	ENSVVUP00000008155	84.9557	82.0059
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.6589	46.6555	ursus_americanus	ENSUAMP00000011245	90.4762	88.5714
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.3244	45.9866	ailuropoda_melanoleuca	ENSAMEP00000037959	89.557	87.0253
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.4615	84.1137	felis_catus	ENSFCAP00000055683	75.2489	71.5505
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	13.3779	10.8696	panthera_pardus	ENSPPRP00000013600	76.1905	61.9048
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	12.8763	10.2007	panthera_pardus	ENSPPRP00000014404	70	55.4545
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	46.6555	45.3177	balaenoptera_musculus	ENSBMSP00010024974	93.9394	91.2458
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	75.9197	72.2408	balaenoptera_musculus	ENSBMSP00010012034	89.7233	85.3755
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.2943	84.1137	equus_caballus	ENSECAP00000082159	82.243	78.3489
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	89.9666	85.9532	bos_taurus	ENSBTAP00000062890	78.655	75.1462
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.2943	83.9465	marmota_marmota_marmota	ENSMMMP00000008128	83.0189	78.9308
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	89.4649	85.1171	ovis_aries_rambouillet	ENSOARP00020013053	78.6765	74.8529
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	45.8194	43.6455	oryctolagus_cuniculus	ENSOCUP00000017147	95.1389	90.625
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	43.4783	41.9732	urocitellus_parryii	ENSUPAP00010014498	91.8728	88.6926
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.6288	83.2776	dipodomys_ordii	ENSDORP00000021215	83.5962	78.5489
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	90.301	85.4515	mus_caroli	MGP_CAROLIEiJ_P0071916	84.1122	79.595
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	90.1338	85.2843	mus_spretus	MGP_SPRETEiJ_P0074737	83.9564	79.4393
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	90.1338	85.2843	mus_musculus	ENSMUSP00000100595	83.9564	79.4393
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	90.1338	84.9498	mus_pahari	MGP_PahariEiJ_P0060130	83.9564	79.1277
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	69.7324	63.7124	cavia_porcellus	ENSCPOP00000021033	77.7985	71.0821
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	86.2876	80.4348	octodon_degus	ENSODEP00000013308	78.0635	72.7685
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	89.2977	85.1171	ursus_maritimus	ENSUMAP00000010143	84.2271	80.2839
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	25.7525	24.5819	bos_grunniens	ENSBGRP00000032960	92.7711	88.5542
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	45.6522	45.485	microcebus_murinus	ENSMICP00000045835	97.153	96.7971
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	91.1371	87.9599	otolemur_garnettii	ENSOGAP00000016810	77.305	74.6099
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	86.7893	80.7692	chinchilla_lanigera	ENSCLAP00000006647	82.7751	77.0335
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	86.6221	82.107	aotus_nancymaae	ENSANAP00000030660	84.7791	80.3601
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	41.1371	39.6321	phocoena_sinus	ENSPSNP00000020698	82	79
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	45.1505	43.9799	monodon_monoceros	ENSMMNP00015000841	92.4658	90.0685
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	88.9632	83.2776	jaculus_jaculus	ENSJJAP00000007911	76.6571	71.7579
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	89.6321	86.1204	catagonus_wagneri	ENSCWAP00000025735	75.7062	72.7401
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	45.9866	44.4816	bison_bison_bison	ENSBBBP00000000645	94.1781	91.0959
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	45.485	43.4783	sciurus_vulgaris	ENSSVLP00005022820	86.3492	82.5397
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	46.99	45.6522	rhinolophus_ferrumequinum	ENSRFEP00010018889	93.9799	91.3043
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	86.4548	83.4448	myotis_lucifugus	ENSMLUP00000019113	81.2893	78.4591
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	89.9666	86.1204	moschus_moschiferus	ENSMMSP00000025011	84.7244	81.1024
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	45.9866	44.4816	bos_mutus	ENSBMUP00000027703	94.1781	91.0959
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	89.4649	86.1204	cervus_hanglu_yarkandensis	ENSCHYP00000035408	84.3849	81.2303
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	10.7023	10.5351	canis_lupus_dingo	ENSCAFP00020021917	85.3333	84
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	48.8294	47.3244	neovison_vison	ENSNVIP00000006776	94.8052	91.8831
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	55.3512	40.4682	caenorhabditis_elegans	T15H9.6.1	59.7473	43.6823
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	55.5184	41.6388	caenorhabditis_elegans	F43G6.5.1	59.9278	44.9458
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	58.0268	41.806	caenorhabditis_elegans	Y32F6A.3.1	52.9771	38.1679
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	67.7258	52.0067	drosophila_melanogaster	FBpp0303281	48.9722	37.6058
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	46.99	35.2843	cyclopterus_lumpus	ENSCLMP00005037493	68.0387	51.0896
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.8261	34.2809	haplochromis_burtoni	ENSHBUP00000013937	71.1443	50.995
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.9933	34.4482	astatotilapia_calliptera	ENSACLP00000037268	65.8257	47.2477
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.8261	34.1137	neolamprologus_brichardi	ENSNBRP00000025146	66.9789	47.7752
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.3244	35.9532	labrus_bergylta	ENSLBEP00000008651	70.75	53.75
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	33.9465	26.4214	amphiprion_ocellaris	ENSAOCP00000016740	73.0216	56.8345
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	46.4883	34.6154	amphiprion_ocellaris	ENSAOCP00000013307	61.2335	45.5947
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	32.7759	25.7525	acanthochromis_polyacanthus	ENSAPOP00000034030	76.2646	59.9222
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	47.9933	34.4482	maylandia_zebra	ENSMZEP00005013592	65.8257	47.2477
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	44.6488	33.612	amphiprion_percula	ENSAPEP00000023219	59.5982	44.8661
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	48.3278	34.1137	pundamilia_nyererei	ENSPNYP00000029857	69.9758	49.3947
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	51.1706	34.9498	saccharomyces_cerevisiae	YKR002W	53.8732	36.7958
ENSPSMG00000001032	prolemur_simus	ENSPSMP00000001370	19.7324	14.7157	larimichthys_crocea	ENSLCRP00005021001	73.2919	54.6584

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression