RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPSIG00000015501	Gene ID	102452883	Accession	-
Symbol		Alias	-	Full Name	threonyl-tRNA synthetase 2, mitochondrial
Status	Confidence	Length	31568 bases	Strand	Plus strand
Position	JH207535.1 : 168590 - 200157	RNA binding domain	HGTP_anticodon , tRNA_SAD , tRNA-synt_2b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPSIP00000017599	HGTP_anticodon	PF03129	4.9e-19	1
ENSPSIP00000017599	tRNA_SAD	PF07973	1.2e-11	2
ENSPSIP00000017599	tRNA-synt_2b	PF00587	8.3e-36	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPSIT00000017678	2175	655aa	ENSPSIP00000017599

Gene Model

Click here to download ENSPSIG00000015501's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPSIG00000015501's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000009229	82.0998	65.0602	pelodiscus_sinensis	ENSPSIP00000017599	72.8244	57.7099
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000016319	35.694	20.9632	pelodiscus_sinensis	ENSPSIP00000017599	19.2366	11.2977
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017653	59.0656	48.1646	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	66.1069

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	73.8931	58.3206	ciona_intestinalis	ENSCINP00000008908	76.9475	60.7313
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	65.1908	petromyzon_marinus	ENSPMAP00000005505	65.0735	52.3284
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.458	64.7328	eptatretus_burgeri	ENSEBUP00000017573	68.0879	54.7804
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	65.1908	52.0611	lepisosteus_oculatus	ENSLOCP00000017977	54.8139	43.7741
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	70.5343	56.1832	latimeria_chalumnae	ENSLACP00000009891	66.5706	53.0259
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	66.2595	clupea_harengus	ENSCHAP00000016446	65.1163	53.1212
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	55.7252	47.3282	danio_rerio	ENSDARP00000138354	84.2956	71.5935
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	73.5878	60.1527	carassius_auratus	ENSCARP00000057394	62.4352	51.0363
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	66.7176	astyanax_mexicanus	ENSAMXP00000021476	62.0327	51.0514
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.916	66.7176	ictalurus_punctatus	ENSIPUP00000015009	64.4769	53.163
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.1527	66.4122	electrophorus_electricus	ENSEEEP00000006889	63.3293	52.4729
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.7634	66.7176	esox_lucius	ENSELUP00000030269	64.8284	53.5539
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	67.0229	oncorhynchus_kisutch	ENSOKIP00005035456	64.6489	53.1477
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	67.0229	oncorhynchus_kisutch	ENSOKIP00005054611	64.4498	53.0834
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	66.8702	oncorhynchus_mykiss	ENSOMYP00000069416	64.3289	52.9625
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	67.0229	oncorhynchus_mykiss	ENSOMYP00000098148	64.3373	52.8916
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.7176	salmo_trutta	ENSSTUP00000032626	59.8876	49.1011
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	78.1679	63.9695	salmo_trutta	ENSSTUP00000062044	66.0645	54.0645
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80	65.3435	salmo_salar	ENSSSAP00000093598	66.2453	54.1087
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.8702	salmo_salar	ENSSSAP00000099040	64.1396	52.7076
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	66.4122	gadus_morhua	ENSGMOP00000060370	65.1961	53.3088
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	78.9313	63.8168	fundulus_heteroclitus	ENSFHEP00000009164	50.0969	40.5039
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	76.6412	62.5954	poecilia_reticulata	ENSPREP00000011963	64.4416	52.6316
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	66.4122	xiphophorus_maculatus	ENSXMAP00000016731	65.7248	53.4398
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.9847	66.7176	oryzias_latipes	ENSORLP00000017952	66.133	53.8177
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	64.7328	54.3511	cyclopterus_lumpus	ENSCLMP00005001344	76.5343	64.2599
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	65.8015	oreochromis_niloticus	ENSONIP00000077600	63.9759	51.9277
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	65.3435	haplochromis_burtoni	ENSHBUP00000018833	65.3563	52.5799
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	65.8015	astatotilapia_calliptera	ENSACLP00000027394	65.4791	52.9484
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.8321	66.2595	sparus_aurata	ENSSAUP00010056034	65.9287	53.3825
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.8321	66.5649	lates_calcarifer	ENSLCAP00010059044	65.9287	53.6285
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	83.6641	69.9237	xenopus_tropicalis	ENSXETP00000077067	72.0105	60.184
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	95.4198	90.3817	chrysemys_picta_bellii	ENSCPBP00000010762	87.7809	83.1461
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	73.2824	64.8855	sphenodon_punctatus	ENSSPUP00000000933	73.2824	64.8855
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.458	62.7481	notechis_scutatus	ENSNSUP00000026521	66.0401	51.5038
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	65.8015	dicentrarchus_labrax	ENSDLAP00005057382	62.077	50.2917
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	42.9008	33.2824	neolamprologus_brichardi	ENSNBRP00000010352	58.5417	45.4167
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.4122	cynoglossus_semilaevis	ENSCSEP00000017371	65.5597	53.5055
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	41.9847	36.6412	erpetoichthys_calabaricus	ENSECRP00000011607	82.8313	72.2892
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	66.7176	nothobranchius_furzeri	ENSNFUP00015049182	65.6827	53.7515
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	66.2595	oryzias_javanicus	ENSOJAP00000010930	65.8446	53.5142
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	66.1069	amphilophus_citrinellus	ENSACIP00000006646	76.3195	61.7689
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	65.8015	amphiprion_ocellaris	ENSAOCP00000023269	65.8057	53.0135
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.7634	66.2595	myripristis_murdjan	ENSMMDP00005043456	65.0676	53.3825
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	66.7176	oryzias_melastigma	ENSOMEP00000015536	65.8446	53.8841
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	77.4046	62.2901	scophthalmus_maximus	ENSSMAP00000047848	64.3401	51.7766
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	65.6489	mastacembelus_armatus	ENSMAMP00000007787	64.6772	52.3752
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	65.9542	gasterosteus_aculeatus	ENSGACP00000019326	73.416	59.5041
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	71.2977	58.0153	acanthochromis_polyacanthus	ENSAPOP00000018376	82.8014	67.3759
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.916	65.9542	paramormyrops_kingsleyae	ENSPKIP00000001925	65.6753	53.5316
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	92.8244	86.8702	terrapene_carolina_triunguis	ENSTMTP00000008708	75.1545	70.3337
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	65.6489	amphiprion_percula	ENSAPEP00000011213	65.5597	52.8905
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.916	65.9542	denticeps_clupeoides	ENSDCDP00000055418	73.3057	59.751
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.916	65.9542	denticeps_clupeoides	ENSDCDP00000057454	66.1673	53.9326
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	66.1069	cyprinodon_variegatus	ENSCVAP00000025076	66.2516	53.9228
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.8702	oncorhynchus_tshawytscha	ENSOTSP00005029322	64.4498	52.9625
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	66.8702	oncorhynchus_tshawytscha	ENSOTSP00005027687	64.5707	52.9625
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	79.084	63.5115	oryzias_sinensis	ENSOSIP00000049074	62.4849	50.1809
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.8702	pygocentrus_nattereri	ENSPNAP00000009846	64.5278	53.0266
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	66.7176	poecilia_latipinna	ENSPLAP00000008551	65.7248	53.6855
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	19.542	13.7405	tetraodon_nigroviridis	ENSTNIP00000004523	66.3212	46.6321
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	79.8473	65.8015	tetraodon_nigroviridis	ENSTNIP00000014887	65.375	53.875
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	79.2366	64.7328	sander_lucioperca	ENSSLUP00000033593	65.201	53.2663
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.2214	66.2595	stegastes_partitus	ENSSPAP00000027138	65.598	53.5142
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	66.4122	seriola_lalandi_dorsalis	ENSSLDP00000021232	65.8057	53.5055
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.916	65.8015	betta_splendens	ENSBSLP00000032264	65.513	53.2757
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.5267	66.4122	larimichthys_crocea	ENSLCRP00005026868	65.4412	53.3088
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.6107	65.4962	hippocampus_comes	ENSHCOP00000017521	73.4353	59.6662
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.3053	65.6489	takifugu_rubripes	ENSTRUP00000007981	65.3416	53.4161
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	65.6489	maylandia_zebra	ENSMZEP00005007500	65.4791	52.8256
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.2595	cyprinus_carpio_carpio	ENSCCRP00000116822	66.7084	54.3179
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	65.8015	cyprinus_carpio_carpio	ENSCCRP00000085847	64.9939	52.754
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	78.9313	63.3588	pundamilia_nyererei	ENSPNYP00000012924	79.173	63.5528
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	66.2595	seriola_dumerili	ENSSDUP00000010245	65.8057	53.3825
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	66.1069	kryptolebias_marmoratus	ENSKMAP00000002310	65.0735	53.0637
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	11.6031	10.687	hucho_hucho	ENSHHUP00000019936	81.7204	75.2688
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.6107	63.5115	naja_naja	ENSNNAP00000007895	67.7792	53.4018
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	77.8626	62.7481	sinocyclocheilus_grahami	ENSSGRP00000045222	65.3846	52.6923
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	95.4198	89.0076	gopherus_evgoodei	ENSGEVP00005020659	89.1583	83.1669
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	79.8473	66.1069	leptobrachium_leishanense	ENSLLEP00000043309	77.1386	63.8643
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	80.7634	66.4122	scleropages_formosus	ENSSFOP00015026586	60.9447	50.1152
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.0687	65.9542	anabas_testudineus	ENSATEP00000005783	65.4747	53.2676
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	92.5191	86.2595	chelonoidis_abingdonii	ENSCABP00000014521	79.3194	73.9529
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	10.8397	7.78626	cottoperca_gobio	ENSCGOP00000032885	52.2059	37.5
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	55.1145	47.7863	cottoperca_gobio	ENSCGOP00000033007	83.3718	72.2864
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	55.1145	47.7863	cottoperca_gobio	ENSCGOP00000032877	83.3718	72.2864
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	77.2519	62.7481	labrus_bergylta	ENSLBEP00000023801	79.685	64.7244
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.374	66.1069	labrus_bergylta	ENSLBEP00000024260	65.2387	52.9988
ENSPSIG00000015501	pelodiscus_sinensis	ENSPSIP00000017599	81.6794	66.7176	poecilia_formosa	ENSPFOP00000014158	65.6442	53.6196

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression