RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPSIG00000008818	Gene ID	102446232	Accession	-
Symbol	RPS3	Alias	-	Full Name	ribosomal protein S3
Status	Confidence	Length	14100 bases	Strand	Minus strand
Position	JH210954.1 : 327586 - 341685	RNA binding domain	KH_2 , Ribosomal_S3_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPSIP00000009770	KH_2	PF07650	1.5e-11	1
ENSPSIP00000009770	Ribosomal_S3_C	PF00189	9.7e-24	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPSIT00000009818	2240	243aa	ENSPSIP00000009770

Gene Model

Click here to download ENSPSIG00000008818's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPSIG00000008818's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000006352	39.6825	24.6032	pelodiscus_sinensis	ENSPSIP00000009770	20.5761	12.7572

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	85.1852	74.8971	caenorhabditis_elegans	C23G10.3.1	83.8057	73.6842
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	87.2428	80.2469	drosophila_melanogaster	FBpp0312066	86.1789	79.2683
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	88.0658	84.7737	ciona_intestinalis	ENSCINP00000010313	81.3688	78.327
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	78.6008	73.6626	petromyzon_marinus	ENSPMAP00000008596	95.5	89.5
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	59.2593	53.9095	eptatretus_burgeri	ENSEBUP00000005415	79.558	72.3757
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.9424	callorhinchus_milii	ENSCMIP00000043843	96	95.2
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	95.4733	94.6502	latimeria_chalumnae	ENSLACP00000006908	91.3386	90.5512
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	95.8848	93.4156	clupea_harengus	ENSCHAP00000032981	92.0949	89.7233
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.5309	danio_rerio	ENSDARP00000153775	97.9592	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.2963	93.0041	carassius_auratus	ENSCARP00000026153	91.0506	87.9377
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.9424	astyanax_mexicanus	ENSAMXP00000014035	97.9592	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.9424	ictalurus_punctatus	ENSIPUP00000008346	97.9592	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	95.8848	gadus_morhua	ENSGMOP00000000845	96.3415	94.7154
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	97.5309	poecilia_reticulata	ENSPREP00000025968	96.7347	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	97.5309	xiphophorus_maculatus	ENSXMAP00000024932	96.7347	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.9424	97.5309	oryzias_latipes	ENSORLP00000000748	97.1429	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	97.1193	cyclopterus_lumpus	ENSCLMP00005012497	96.7347	96.3265
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	haplochromis_burtoni	ENSHBUP00000001180	87.2263	86.8613
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	astatotilapia_calliptera	ENSACLP00000020299	86.2816	85.9206
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	97.1193	sparus_aurata	ENSSAUP00010011575	96.7347	96.3265
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.2963	94.6502	lates_calcarifer	ENSLCAP00010027748	93.9759	92.3695
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.2963	94.6502	lates_calcarifer	ENSLCAP00010019371	93.9759	92.3695
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	96.7078	xenopus_tropicalis	ENSXETP00000099523	92.5781	91.7969
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	81.07	78.1893	chrysemys_picta_bellii	ENSCPBP00000040238	91.6279	88.3721
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	45.2675	43.6214	chrysemys_picta_bellii	ENSCPBP00000033328	82.7068	79.6992
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	99.5885	99.5885	crocodylus_porosus	ENSCPRP00005025112	99.5885	99.5885
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	94.6502	94.6502	sphenodon_punctatus	ENSSPUP00000022389	98.7124	98.7124
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	anas_platyrhynchos_platyrhynchos	ENSAPLP00000014372	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	gallus_gallus	ENSGALP00010004125	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	parus_major	ENSPMJP00000001306	88.3636	88.3636
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.1193	96.2963	serinus_canaria	ENSSCAP00000000208	95.935	95.1219
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	95.8848	sarcophilus_harrisii	ENSSHAP00000028604	92.5781	91.0156
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.5309	ornithorhynchus_anatinus	ENSOANP00000046763	77.9221	76.9481
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	42.3868	37.8601	dasypus_novemcinctus	ENSDNOP00000032658	77.4436	69.1729
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	95.0617	macaca_fascicularis	ENSMFAP00000056565	83.4507	81.338
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	95.0617	macaca_nemestrina	ENSMNEP00000016018	83.4507	81.338
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	42.3868	35.8025	vulpes_vulpes	ENSVVUP00000021885	76.2963	64.4444
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	98.7654	ailuropoda_melanoleuca	ENSAMEP00000034008	98.7654	98.7654
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	98.7654	ailuropoda_melanoleuca	ENSAMEP00000030904	98.7654	98.7654
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	98.7654	ailuropoda_melanoleuca	ENSAMEP00000025098	98.7654	98.7654
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	73.6626	71.1934	mus_spicilegus	ENSMSIP00000008869	84.434	81.6038
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.1193	95.4733	rattus_norvegicus	ENSRNOP00000023935	96.3265	94.6939
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	95.4733	94.6502	dicentrarchus_labrax	ENSDLAP00005012215	94.3089	93.4959
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	neolamprologus_brichardi	ENSNBRP00000008007	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.2963	95.8848	ursus_maritimus	ENSUMAP00000014686	95.5102	95.102
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.7078	95.8848	ictidomys_tridecemlineatus	ENSSTOP00000024446	96.3115	95.4918
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	77.7778	76.1317	nomascus_leucogenys	ENSNLEP00000047898	99.4737	97.3684
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	95.8848	95.0617	anolis_carolinensis	ENSACAP00000029870	82.6241	81.9149
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	46.5021	44.856	bos_mutus	ENSBMUP00000026521	98.2609	94.7826
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	77.7778	66.2551	saccharomyces_cerevisiae	YNL178W	78.75	67.0833
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.5309	cynoglossus_semilaevis	ENSCSEP00000022665	97.551	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	86.4198	82.3045	geospiza_fortis	ENSGFOP00000002947	85.0202	80.9717
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	90.9465	87.6543	saimiri_boliviensis_boliviensis	ENSSBOP00000009876	88.0478	84.8606
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.1193	95.0617	erpetoichthys_calabaricus	ENSECRP00000002828	94.7791	92.7711
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.9424	97.5309	oryzias_javanicus	ENSOJAP00000048705	95.2	94.8
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	98.3539	amphilophus_citrinellus	ENSACIP00000030409	97.551	97.551
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	amphiprion_ocellaris	ENSAOCP00000009508	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.1193	coturnix_japonica	ENSCJPP00005006232	98.7603	97.5207
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	95.8848	95.8848	struthio_camelus_australis	ENSSCUP00000012133	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	88.0658	84.7737	ciona_savignyi	ENSCSAVP00000005843	83.2685	80.1556
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.1193	myripristis_murdjan	ENSMMDP00005010351	86.9091	85.8182
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	67.9012	67.4897	oryzias_melastigma	ENSOMEP00000018872	91.1602	90.6077
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.5309	scophthalmus_maximus	ENSSMAP00000056221	97.1545	96.3415
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	39.9177	36.6255	jaculus_jaculus	ENSJJAP00000016511	90.6542	83.1776
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.9424	mastacembelus_armatus	ENSMAMP00000039486	96	95.2
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.9424	97.5309	gasterosteus_aculeatus	ENSGACP00000017707	97.1429	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	39.5062	38.2716	microcebus_murinus	ENSMICP00000050283	96.9697	93.9394
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.7078	93.8272	paramormyrops_kingsleyae	ENSPKIP00000008644	90.0383	87.3563
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	terrapene_carolina_triunguis	ENSTMTP00000002545	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	amphiprion_percula	ENSAPEP00000032116	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	aquila_chrysaetos_chrysaetos	ENSACCP00020015068	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	95.8848	denticeps_clupeoides	ENSDCDP00000050154	84.7518	82.6241
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.9424	97.5309	cyprinodon_variegatus	ENSCVAP00000024876	97.1429	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.9424	97.5309	oryzias_sinensis	ENSOSIP00000018310	87.1795	86.8132
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	ficedula_albicollis	ENSFALP00000008301	70.8455	70.8455
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.9424	pygocentrus_nattereri	ENSPNAP00000031346	97.9592	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	strigops_habroptila	ENSSHBP00005023390	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	97.5309	poecilia_latipinna	ENSPLAP00000021913	96.7347	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	sander_lucioperca	ENSSLUP00000042619	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	98.3539	stegastes_partitus	ENSSPAP00000029604	97.9592	97.551
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.5309	seriola_lalandi_dorsalis	ENSSLDP00000023121	97.551	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.1193	betta_splendens	ENSBSLP00000020362	95.6	94.4
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	94.2387	93.4156	larimichthys_crocea	ENSLCRP00005007718	92.7125	91.9028
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	96.2963	94.2387	hippocampus_comes	ENSHCOP00000003692	94.7368	92.7125
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	90.535	88.8889	takifugu_rubripes	ENSTRUP00000065252	88	86.4
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	maylandia_zebra	ENSMZEP00005033090	86.2816	85.9206
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	94.6502	92.5926	cyprinus_carpio_carpio	ENSCCRP00000110119	90.5512	88.5827
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	96.7078	cyprinus_carpio_carpio	ENSCCRP00000034085	95.6	94
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	99.177	98.7654	salvator_merianae	ENSSMRP00000008585	99.177	98.7654
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	pundamilia_nyererei	ENSPNYP00000009784	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.5309	seriola_dumerili	ENSSDUP00000005877	97.551	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	anser_brachyrhynchus	ENSABRP00000017442	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	kryptolebias_marmoratus	ENSKMAP00000013000	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	94.6502	sinocyclocheilus_grahami	ENSSGRP00000091864	91.8605	89.1473
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	100	100	gopherus_evgoodei	ENSGEVP00005000217	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	96.7078	scleropages_formosus	ENSSFOP00015003518	95.6	94
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.1193	anabas_testudineus	ENSATEP00000004991	95.6	94.4
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	91.7695	91.7695	chelonoidis_abingdonii	ENSCABP00000019574	100	100
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.7654	97.5309	cottoperca_gobio	ENSCGOP00000019138	97.9592	96.7347
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	98.3539	97.9424	labrus_bergylta	ENSLBEP00000027781	97.551	97.1429
ENSPSIG00000008818	pelodiscus_sinensis	ENSPSIP00000009770	97.5309	97.5309	poecilia_formosa	ENSPFOP00000013876	96.7347	96.7347

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression