Description

Ensembl ID ENSPREG00000004213 Gene ID 103482173 Accession -
Symbol tdrkh Alias - Full Name tudor and KH domain containing
Status Confidence Length 12269 bases Strand Minus strand
Position LG19 : 28104487 - 28116755 RNA binding domain KH_1 , TUDOR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPREP00000006136 KH_1 PF00013 9e-17 1
ENSPREP00000006136 TUDOR PF00567 9.3e-25 2
ENSPREP00000006111 KH_1 PF00013 2.8e-13 1
ENSPREP00000006111 TUDOR PF00567 1.1e-19 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
tdrkh-201 ENSPRET00000006195 1671 556aa ENSPREP00000006111
tdrkh-202 ENSPRET00000006220 1764 587aa ENSPREP00000006136

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPREG00000004213poecilia_reticulataENSPREP0000002626110.2475.67246poecilia_reticulataENSPREP0000000613619.080110.5622
ENSPREG00000004213poecilia_reticulataENSPREP0000001804515.21169.12698poecilia_reticulataENSPREP0000000613619.591111.7547
ENSPREG00000004213poecilia_reticulataENSPREP000000278278.878724.85126poecilia_reticulataENSPREP0000000613633.049418.0579
ENSPREG00000004213poecilia_reticulataENSPREP0000002179211.50136.67252poecilia_reticulataENSPREP0000000613622.316912.9472
ENSPREG00000004213poecilia_reticulataENSPREP0000000034812.08056.20805poecilia_reticulataENSPREP0000000613624.531512.6065
ENSPREG00000004213poecilia_reticulataENSPREP0000003345811.14865.91216poecilia_reticulataENSPREP0000000613622.487211.925

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.083563.5434amphilophus_citrinellusENSACIP0000001327379.297668.9464
ENSPREG00000004213poecilia_reticulataENSPREP0000000613689.608287.3935poecilia_latipinnaENSPLAP0000002089196.513894.1284
ENSPREG00000004213poecilia_reticulataENSPREP0000000613682.112475.1278fundulus_heteroclitusENSFHEP0000000273587.636480.1818
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.172167.121sparus_aurataENSSAUP0001002996177.172167.121
ENSPREG00000004213poecilia_reticulataENSPREP0000000613670.868860.477neolamprologus_brichardiENSNBRP0000003135177.467466.108
ENSPREG00000004213poecilia_reticulataENSPREP0000000613675.468565.4174scophthalmus_maximusENSSMAP0000000248977.043566.7826
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.424262.862betta_splendensENSBSLP0000001014275.481664.6235
ENSPREG00000004213poecilia_reticulataENSPREP0000000613689.778587.9046poecilia_formosaENSPFOP0000001302791.334589.4281
ENSPREG00000004213poecilia_reticulataENSPREP0000000613676.320367.2913seriola_dumeriliENSSDUP0000001832379.715370.2847
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.342467.8024dicentrarchus_labraxENSDLAP0000500793777.210967.6871
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.764962.6917maylandia_zebraENSMZEP0000500891478.300266.5461
ENSPREG00000004213poecilia_reticulataENSPREP0000000613672.572459.2845cynoglossus_semilaevisENSCSEP0000000445675.26561.4841
ENSPREG00000004213poecilia_reticulataENSPREP0000000613653.83346.8484cyprinodon_variegatusENSCVAP0000001720372.146162.7854
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.935362.1806gasterosteus_aculeatusENSGACP0000002012575.874163.8112
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.683167.4617stegastes_partitusENSSPAP0000000844277.419467.2326
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.764962.6917haplochromis_burtoniENSHBUP0000001570978.300266.5461
ENSPREG00000004213poecilia_reticulataENSPREP0000000613671.379960.477tetraodon_nigroviridisENSTNIP0000000573373.63862.3902
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.083564.2249cottoperca_gobioENSCGOP0000003545279.151369.5572
ENSPREG00000004213poecilia_reticulataENSPREP0000000613686.541783.4753xiphophorus_maculatusENSXMAP0000001478894.248690.9091
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.424262.862oreochromis_niloticusENSONIP0000001709177.938566.7269
ENSPREG00000004213poecilia_reticulataENSPREP0000000613676.320365.9285larimichthys_croceaENSLCRP0000501471753.206645.962
ENSPREG00000004213poecilia_reticulataENSPREP0000000613673.424261.1584takifugu_rubripesENSTRUP0000006245570.081358.374
ENSPREG00000004213poecilia_reticulataENSPREP0000000613672.40261.3288oryzias_javanicusENSOJAP0000001572272.649661.5385
ENSPREG00000004213poecilia_reticulataENSPREP0000000613675.809265.247labrus_bergyltaENSLBEP0000003652278.070267.193
ENSPREG00000004213poecilia_reticulataENSPREP0000000613672.913162.5213pundamilia_nyerereiENSPNYP0000003028077.39666.3653
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.172166.4395amphiprion_perculaENSAPEP0000002584481.182869.8925
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.172166.7802anabas_testudineusENSATEP0000003464577.435967.0085
ENSPREG00000004213poecilia_reticulataENSPREP0000000613670.01759.7956astatotilapia_callipteraENSACLP0000000450873.920963.1295
ENSPREG00000004213poecilia_reticulataENSPREP0000000613674.105663.7138cyclopterus_lumpusENSCLMP0000504904378.804367.7536
ENSPREG00000004213poecilia_reticulataENSPREP0000000613659.284549.9148nothobranchius_furzeriENSNFUP0001503723574.35962.6068
ENSPREG00000004213poecilia_reticulataENSPREP0000000613676.490667.632seriola_lalandi_dorsalisENSSLDP0000002232072.186563.8264
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.001765.9285acanthochromis_polyacanthusENSAPOP0000001024071.51961.2342
ENSPREG00000004213poecilia_reticulataENSPREP0000000613672.572460.9881oryzias_sinensisENSOSIP0000004377478.165165.6881
ENSPREG00000004213poecilia_reticulataENSPREP0000000613677.172166.2692amphiprion_ocellarisENSAOCP0000001578181.182869.7133
ENSPREG00000004213poecilia_reticulataENSPREP0000000613674.616764.7359mastacembelus_armatusENSMAMP0000003018875.257765.2921
ENSPREG00000004213poecilia_reticulataENSPREP0000000613672.572461.6695oryzias_melastigmaENSOMEP0000001359072.820561.8803
ENSPREG00000004213poecilia_reticulataENSPREP0000000613676.490667.632sander_luciopercaENSSLUP0000001323275.335666.6107
ENSPREG00000004213poecilia_reticulataENSPREP0000000613672.742861.1584oryzias_latipesENSORLP0000004502078.348665.8716
ENSPREG00000004213poecilia_reticulataENSPREP0000000613676.320365.9285kryptolebias_marmoratusENSKMAP0000002241575.803765.4822
ENSPREG00000004213poecilia_reticulataENSPREP0000000613638.330518.7394drosophila_melanogasterFBpp007750939.062519.0972
ENSPREG00000004213poecilia_reticulataENSPREP0000000613626.235114.9915eptatretus_burgeriENSEBUP0000000451543.258424.7191
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.94726.30324latimeria_chalumnaeENSLACP0000001676621.288510.3641
ENSPREG00000004213poecilia_reticulataENSPREP0000000613660.647445.6559lepisosteus_oculatusENSLOCP0000001401061.063545.9691
ENSPREG00000004213poecilia_reticulataENSPREP0000000613666.609952.4702danio_rerioENSDARP0000000509768.237453.7522
ENSPREG00000004213poecilia_reticulataENSPREP0000000613668.654253.322carassius_auratusENSCARP0000011194045.795535.5682
ENSPREG00000004213poecilia_reticulataENSPREP0000000613668.824553.4923carassius_auratusENSCARP0000011985745.909135.6818
ENSPREG00000004213poecilia_reticulataENSPREP0000000613667.802452.9813astyanax_mexicanusENSAMXP0000003760542.340433.0851
ENSPREG00000004213poecilia_reticulataENSPREP0000000613667.802454.0034ictalurus_punctatusENSIPUP0000001413943.929434.989
ENSPREG00000004213poecilia_reticulataENSPREP0000000613663.202750.5963electrophorus_electricusENSEEEP0000003372369.868255.9322
ENSPREG00000004213poecilia_reticulataENSPREP0000000613669.335657.7513esox_luciusENSELUP0000004300738.688232.2243
ENSPREG00000004213poecilia_reticulataENSPREP0000000613669.165256.3884oncorhynchus_kisutchENSOKIP0000504136142.291734.4792
ENSPREG00000004213poecilia_reticulataENSPREP0000000613668.994956.3884oncorhynchus_mykissENSOMYP0000005185240.826633.3669
ENSPREG00000004213poecilia_reticulataENSPREP0000000613668.994956.2181salmo_salarENSSSAP0000006018442.143634.3392
ENSPREG00000004213poecilia_reticulataENSPREP0000000613669.335656.3884salmo_truttaENSSTUP0000004141844.383936.096
ENSPREG00000004213poecilia_reticulataENSPREP0000000613670.357757.5809gadus_morhuaENSGMOP0000000994672.839559.612
ENSPREG00000004213poecilia_reticulataENSPREP0000000613614.31016.81431xenopus_tropicalisENSXETP0000004968311.53855.49451
ENSPREG00000004213poecilia_reticulataENSPREP0000000613613.11757.32538crocodylus_porosusENSCPRP0000501971410.54795.89041
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.39185.62181notechis_scutatusENSNSUP0000000730920.748311.2245
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.43616.30324chrysemys_picta_belliiENSCPBP0000003538321.098310.6936
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.58436.30324macaca_mulattaENSMMUP0000002567519.373210.5413
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.26586.47359sarcophilus_harrisiiENSSHAP0000003427717.14299.04762
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.22155.45145notamacropus_eugeniiENSMEUP0000000338217.75159.46746
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.4146.13288papio_anubisENSPANP0000002885216.7929.02256
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.60656.81431bos_taurusENSBTAP0000007382419.371710.4712
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.58436.30324mandrillus_leucophaeusENSMLEP0000002363018.579210.1093
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.75476.13288callithrix_jacchusENSCJAP0000001748018.90419.86301
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.58436.30324pan_paniscusENSPPAP0000000675818.630110.137
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09546.81431delphinapterus_leucasENSDLEP0000001405120.227911.396
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.58436.64395tursiops_truncatusENSTTRP0000001327219.88311.4035
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.26586.81431capra_hircusENSCHIP0000002577318.848210.4712
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.60656.47359monodelphis_domesticaENSMODP0000005374518.36239.42928
ENSPREG00000004213poecilia_reticulataENSPREP000000061365.451453.06644sphenodon_punctatusENSSPUP0000000380522.69512.766
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09546.81431monodon_monocerosENSMMNP0001501903820.227911.396
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.60656.98467ovis_aries_rambouilletENSOARP0002000255721.082611.6809
ENSPREG00000004213poecilia_reticulataENSPREP000000061368.517894.94037erpetoichthys_calabaricusENSECRP0000002652224.390214.1463
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.75476.30324pongo_abeliiENSPPYP0000000090719.658110.5413
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.24366.30324cercocebus_atysENSCATP0000003363118.591510.4225
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.9256.30324homo_sapiensENSP0000035746719.94310.5413
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.60657.15503moschus_moschiferusENSMMSP0000001409721.142912
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09546.30324phascolarctos_cinereusENSPCIP0000002921619.559210.1928
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.77687.15503bos_grunniensENSBGRP0000001323021.367511.9658
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.56225.28109nomascus_leucogenysENSNLEP0000001383419.25479.62733
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.26586.64395camelus_dromedariusENSCDRP0000502859720.512811.1111
ENSPREG00000004213poecilia_reticulataENSPREP000000061368.688254.59966loxodonta_africanaENSLAFP0000001214125.373113.4328
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09546.98467balaenoptera_musculusENSBMSP0001000183120.285711.7143
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.58436.30324macaca_nemestrinaENSMNEP0000004283718.579210.1093
ENSPREG00000004213poecilia_reticulataENSPREP000000061369.540034.94037laticauda_laticaudataENSLLTP0000001095427.053114.0097
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.75476.13288aotus_nancymaaeENSANAP0000002027519.658110.2564
ENSPREG00000004213poecilia_reticulataENSPREP0000000613613.96937.6661naja_najaENSNNAP0000000591120.246911.1111
ENSPREG00000004213poecilia_reticulataENSPREP0000000613613.45837.32538bos_indicus_hybridENSBIXP0000502983719.268310.4878
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.73255.79216gopherus_evgoodeiENSGEVP0000501863420.192310.8974
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09546.81431phocoena_sinusENSPSNP0000000422820.227911.396
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.43616.81431carlito_syrichtaENSTSYP0000001092520.054910.989
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.73255.62181rhinopithecus_roxellanaENSRROP0000003607118.63919.76331
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.75476.64395gorilla_gorillaENSGGOP0000003593118.852510.6557
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.9256.13288equus_caballusENSECAP0000002073611.00635.66038
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.9256.13288physeter_catodonENSPCTP000050180482010.2857
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.77687.15503bison_bison_bisonENSBBBP0000000510121.367511.9658
ENSPREG00000004213poecilia_reticulataENSPREP0000000613663.032449.063paramormyrops_kingsleyaeENSPKIP0000004080043.325533.7237
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09545.62181podarcis_muralisENSPMRP0000002444120.22799.40171
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.4146.13288rhinopithecus_bietiENSRBIP0000000823517.77199.54907
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.90295.45145myotis_lucifugusENSMLUP0000001612117.48638.74317
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.4146.47359rhinolophus_ferrumequinumENSRFEP0001002940718.256110.3542
ENSPREG00000004213poecilia_reticulataENSPREP0000000613666.439552.6405pygocentrus_nattereriENSPNAP0000000238043.526834.4866
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.9256.64395propithecus_coquereliENSPCOP0000003038919.021710.5978
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.75476.47359pan_troglodytesENSPTRP0000007666918.852510.3825
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.07336.30324sus_scrofaENSSSCP0000003587419.637511.1782
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.56225.96252chelonoidis_abingdoniiENSCABP0000000480620.394711.5132
ENSPREG00000004213poecilia_reticulataENSPREP0000000613671.209561.3288myripristis_murdjanENSMMDP0000505202272.193462.1762
ENSPREG00000004213poecilia_reticulataENSPREP000000061366.984673.57751pteropus_vampyrusENSPVAP0000000447115.24167.80669
ENSPREG00000004213poecilia_reticulataENSPREP000000061366.132883.2368tupaia_belangeriENSTBEP0000001085415.1267.98319
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.58436.30324macaca_fascicularisENSMFAP0000003193219.373210.5413
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.9256.13288cebus_imitatorENSCCAP0000000740319.17819.86301
ENSPREG00000004213poecilia_reticulataENSPREP0000000613668.994955.707oncorhynchus_tshawytschaENSOTSP0000500964843.13134.8243
ENSPREG00000004213poecilia_reticulataENSPREP0000000613667.972753.4923cyprinus_carpio_carpioENSCCRP0000011316245.444235.7631
ENSPREG00000004213poecilia_reticulataENSPREP0000000613666.609952.9813cyprinus_carpio_carpioENSCCRP0000003348143.73634.7875
ENSPREG00000004213poecilia_reticulataENSPREP0000000613667.972753.1516sinocyclocheilus_grahamiENSSGRP0000002896544.137234.5133
ENSPREG00000004213poecilia_reticulataENSPREP0000000613649.403736.2862sinocyclocheilus_grahamiENSSGRP0000004383260.924444.7479
ENSPREG00000004213poecilia_reticulataENSPREP000000061369.880754.77002procavia_capensisENSPCAP0000000086816.81168.11594
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.60656.13288terrapene_carolina_triunguisENSTMTP0000002216719.32119.39948
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.4146.47359microcebus_murinusENSMICP0000000129618.559610.5263
ENSPREG00000004213poecilia_reticulataENSPREP0000000613660.647447.1891denticeps_clupeoidesENSDCDP0000003145060.236946.8697
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.77687.15503bos_mutusENSBMUP0000001426921.367511.9658
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.26586.47359prolemur_simusENSPSMP0000003252519.72610.411
ENSPREG00000004213poecilia_reticulataENSPREP0000000613610.05115.79216salvator_merianaeENSSMRP0000000733517.404110.0295
ENSPREG00000004213poecilia_reticulataENSPREP0000000613660.47746.3373scleropages_formosusENSSFOP0001500146861.101546.8158
ENSPREG00000004213poecilia_reticulataENSPREP0000000613669.165256.0477hucho_huchoENSHHUP0000006613142.96334.8148
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.9255.96252saimiri_boliviensis_boliviensisENSSBOP0000000350119.28379.64187
ENSPREG00000004213poecilia_reticulataENSPREP0000000613612.09546.30324equus_asinusENSEASP000050002837.513233.91534
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.4146.13288chlorocebus_sabaeusENSCSAP0000001608318.3069.83607
ENSPREG00000004213poecilia_reticulataENSPREP0000000613611.75476.30324catagonus_wagneriENSCWAP0000000164819.884710.6628

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression