RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPPRG00000024439	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	554 bases	Strand	Minus strand
Position	KV860334.1 : 8381644 - 8382197	RNA binding domain	Ribosomal_L22
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPPRP00000001000	Ribosomal_L22	PF00237	9.4e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPPRT00000034193	387	128aa	ENSPPRP00000001000

Gene Model

Click here to download ENSPPRG00000024439's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPPRG00000024439's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000024306	49.7297	43.7838	panthera_pardus	ENSPPRP00000001000	71.875	63.2812
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000028391	59.7826	57.0652	panthera_pardus	ENSPPRP00000001000	85.9375	82.0312
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000025252	59.7826	57.0652	panthera_pardus	ENSPPRP00000001000	85.9375	82.0312
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000012704	60.3261	57.0652	panthera_pardus	ENSPPRP00000001000	86.7188	82.0312
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000027280	60.3261	55.9783	panthera_pardus	ENSPPRP00000001000	86.7188	80.4688
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000026189	60.3261	57.0652	panthera_pardus	ENSPPRP00000001000	86.7188	82.0312
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000029289	59.7826	55.9783	panthera_pardus	ENSPPRP00000001000	85.9375	80.4688
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000027539	44.9074	38.8889	panthera_pardus	ENSPPRP00000001000	75.7812	65.625

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	53.125	46.0938	notamacropus_eugenii	ENSMEUP00000015268	57.6271	50
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	52.3438	46.875	choloepus_hoffmanni	ENSCHOP00000006965	51.145	45.8015
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	39.0625	35.1562	erinaceus_europaeus	ENSEEUP00000004431	38.1679	34.3511
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	64.0625	58.5938	echinops_telfairi	ENSETEP00000015775	75.2294	68.8073
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	87.5	82.8125	canis_lupus_familiaris	ENSCAFP00845041249	59.2593	56.0847
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	71.875	63.2812	mustela_putorius_furo	ENSMPUP00000018563	50.2732	44.2623
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	75.7812	70.3125	bos_taurus	ENSBTAP00000043287	69.2857	64.2857
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	80.4688	dipodomys_ordii	ENSDORP00000022505	60.1093	56.2842
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	39.8438	32.8125	tursiops_truncatus	ENSTTRP00000005460	38.9313	32.0611
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	28.9062	24.2188	sorex_araneus	ENSSARP00000001020	31.3559	26.2712
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	53.125	48.4375	pteropus_vampyrus	ENSPVAP00000001859	51.9084	47.3282
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	64.0625	63.2812	heterocephalus_glaber_female	ENSHGLP00000009626	95.3488	94.186
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	53.125	46.0938	procavia_capensis	ENSPCAP00000002899	57.6271	50
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	50	44.5312	bos_mutus	ENSBMUP00000010954	44.4444	39.5833
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	67.9688	53.9062	caenorhabditis_elegans	Y48G8AL.8.1	46.5241	36.8984
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	75	54.6875	drosophila_melanogaster	FBpp0070942	51.6129	37.6344
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	78.125	64.8438	ciona_intestinalis	ENSCINP00000022040	54.6448	45.3552
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	23.4375	18.75	petromyzon_marinus	ENSPMAP00000006771	28.5714	22.8571
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	80.4688	70.3125	eptatretus_burgeri	ENSEBUP00000015038	55.9783	48.913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	79.6875	70.3125	callorhinchus_milii	ENSCMIP00000032634	46.789	41.2844
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	86.7188	80.4688	latimeria_chalumnae	ENSLACP00000010023	60.3261	55.9783
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	lepisosteus_oculatus	ENSLOCP00000014942	58.8235	54.0107
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	84.375	78.125	clupea_harengus	ENSCHAP00000021418	58.6957	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.125	danio_rerio	ENSDARP00000119756	59.7826	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	79.6875	astyanax_mexicanus	ENSAMXP00000029166	48.6607	45.5357
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.125	carassius_auratus	ENSCARP00000055118	51.1628	46.5116
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.125	carassius_auratus	ENSCARP00000018008	42.1456	38.3142
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.125	ictalurus_punctatus	ENSIPUP00000005221	59.2391	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	79.6875	electrophorus_electricus	ENSEEEP00000030490	55.8974	52.3077
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	84.375	78.125	oncorhynchus_kisutch	ENSOKIP00005045335	42.1875	39.0625
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	oncorhynchus_kisutch	ENSOKIP00005044931	51.6588	47.8673
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	esox_lucius	ENSELUP00000025726	58.6021	54.3011
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	84.375	78.125	oncorhynchus_mykiss	ENSOMYP00000089736	58.6957	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	oncorhynchus_mykiss	ENSOMYP00000062114	51.6588	47.8673
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	salmo_trutta	ENSSTUP00000052333	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	84.375	78.125	salmo_trutta	ENSSTUP00000082077	58.6957	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	gadus_morhua	ENSGMOP00000038485	49.7738	45.7014
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	79.6875	poecilia_reticulata	ENSPREP00000018337	60.1093	55.7377
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	fundulus_heteroclitus	ENSFHEP00000001400	46.383	42.9787
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	xiphophorus_maculatus	ENSXMAP00000023050	49.5455	45.9091
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	oryzias_latipes	ENSORLP00000042190	40.8922	37.5465
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	78.9062	71.875	cyclopterus_lumpus	ENSCLMP00005021885	45.7014	41.629
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	76.5625	69.5312	oreochromis_niloticus	ENSONIP00000047928	37.5479	34.0996
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	75.7812	68.75	haplochromis_burtoni	ENSHBUP00000022030	39.4309	35.7724
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	75.7812	68.75	astatotilapia_calliptera	ENSACLP00000014023	39.4309	35.7724
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	79.6875	lates_calcarifer	ENSLCAP00010038470	59.2391	55.4348
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	77.3438	71.875	sphenodon_punctatus	ENSSPUP00000022472	58.9286	54.7619
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.125	xenopus_tropicalis	ENSXETP00000043811	59.7826	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	79.6875	poecilia_latipinna	ENSPLAP00000031609	59.7826	55.4348
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	kryptolebias_marmoratus	ENSKMAP00000021880	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	seriola_dumerili	ENSSDUP00000021663	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.125	takifugu_rubripes	ENSTRUP00000055882	59.2391	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	anabas_testudineus	ENSATEP00000034019	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	betta_splendens	ENSBSLP00000021380	58.9189	54.5946
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	86.7188	80.4688	aquila_chrysaetos_chrysaetos	ENSACCP00020024117	60.3261	55.9783
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	61.7188	42.1875	saccharomyces_cerevisiae	YKL180W	42.9348	29.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	61.7188	41.4062	saccharomyces_cerevisiae	YJL177W	42.9348	28.8043
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	neolamprologus_brichardi	ENSNBRP00000007745	58.2888	54.0107
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	amphiprion_percula	ENSAPEP00000033796	45.9916	42.616
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	pundamilia_nyererei	ENSPNYP00000014140	58.2888	54.0107
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	32.0312	25	oryzias_sinensis	ENSOSIP00000007303	23.0337	17.9775
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.125	tetraodon_nigroviridis	ENSTNIP00000011866	59.2391	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	78.9062	69.5312	amphiprion_ocellaris	ENSAOCP00000010512	45.7014	40.2715
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	63.2812	51.5625	pygocentrus_nattereri	ENSPNAP00000024605	35.3712	28.821
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	dicentrarchus_labrax	ENSDLAP00005057107	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	84.375	78.125	cottoperca_gobio	ENSCGOP00000034147	54.8223	50.7614
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.125	hippocampus_comes	ENSHCOP00000010475	59.2391	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	79.6875	poecilia_formosa	ENSPFOP00000002846	59.7826	55.4348
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	acanthochromis_polyacanthus	ENSAPOP00000031603	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	maylandia_zebra	ENSMZEP00005031231	58.2888	54.0107
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.125	erpetoichthys_calabaricus	ENSECRP00000012311	59.7826	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	cyprinodon_variegatus	ENSCVAP00000017346	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	86.7188	79.6875	salvator_merianae	ENSSMRP00000021296	60.3261	55.4348
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	myripristis_murdjan	ENSMMDP00005050722	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	79.6875	scophthalmus_maximus	ENSSMAP00000064655	9.26871	8.67347
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.125	paramormyrops_kingsleyae	ENSPKIP00000004870	59.2391	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	57.8125	47.6562	cynoglossus_semilaevis	ENSCSEP00000007657	49.0066	40.3974
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	77.3438	70.3125	cynoglossus_semilaevis	ENSCSEP00000032003	46.0465	41.8605
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	77.3438	70.3125	labrus_bergylta	ENSLBEP00000025264	43.4211	39.4737
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	denticeps_clupeoides	ENSDCDP00000002919	53.9216	49.5098
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	denticeps_clupeoides	ENSDCDP00000014824	53.9216	49.5098
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	mastacembelus_armatus	ENSMAMP00000018522	59.2391	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	61.7188	57.0312	chelonoidis_abingdonii	ENSCABP00000008146	65.2893	60.3306
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	79.6875	75.7812	chelonoidis_abingdonii	ENSCABP00000022526	70.8333	67.3611
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	75	68.75	larimichthys_crocea	ENSLCRP00005020732	50.5263	46.3158
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	56.25	51.5625	gopherus_evgoodei	ENSGEVP00005015756	56.6929	51.9685
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	nothobranchius_furzeri	ENSNFUP00015007637	54.2289	50.2488
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	cyprinus_carpio_carpio	ENSCCRP00000048018	56.701	52.0619
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	81.25	75	cyprinus_carpio_carpio	ENSCCRP00000017743	58.427	53.9326
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	76.5625	62.5	ciona_savignyi	ENSCSAVP00000017488	52.1277	42.5532
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	84.375	78.125	hucho_hucho	ENSHHUP00000062459	58.6957	54.3478
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.1562	78.9062	hucho_hucho	ENSHHUP00000066506	51.6588	47.8673
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	79.6875	scleropages_formosus	ENSSFOP00015030085	59.7826	55.4348
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	oryzias_melastigma	ENSOMEP00000024442	59.7826	54.8913
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	85.9375	78.9062	oryzias_javanicus	ENSOJAP00000030762	51.4019	47.1963
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	70.3125	67.1875	sinocyclocheilus_grahami	ENSSGRP00000005346	76.9231	73.5043
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	77.3438	69.5312	gasterosteus_aculeatus	ENSGACP00000017752	52.6596	47.3404
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	78.125	71.0938	sander_lucioperca	ENSSLUP00000056288	54.0541	49.1892
ENSPPRG00000024439	panthera_pardus	ENSPPRP00000001000	78.9062	70.3125	seriola_lalandi_dorsalis	ENSSLDP00000018799	66.4474	59.2105

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression