RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPPAG00000023840	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4731 bases	Strand	Plus strand
Position	1 : 51070388 - 51075118	RNA binding domain	Ribosomal_S5_C , Ribosomal_S5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPPAP00000005886	Ribosomal_S5_C	PF03719	2e-20	1
ENSPPAP00000005886	Ribosomal_S5	PF00333	5.4e-26	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPPAT00000026241	762	253aa	ENSPPAP00000005886

Gene Model

Click here to download ENSPPAG00000023840's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPPAG00000023840's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000002133	78.0488	73.9837	pan_paniscus	ENSPPAP00000005886	75.8893	71.9368
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000033047	71.6667	69.1667	pan_paniscus	ENSPPAP00000005886	67.9842	65.6126
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000035765	63.3745	59.2593	pan_paniscus	ENSPPAP00000005886	60.8696	56.917
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000012107	68.4	64.8	pan_paniscus	ENSPPAP00000005886	67.5889	64.0316

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	84.9802	82.2134	nomascus_leucogenys	ENSNLEP00000036370	83.6576	80.9339
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	88.1423	85.3755	nomascus_leucogenys	ENSNLEP00000030484	88.8446	86.0558
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	98.419	97.6285	pan_troglodytes	ENSPTRP00000078168	94.6768	93.9164
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	51.7787	47.0356	dasypus_novemcinctus	ENSDNOP00000031417	63.285	57.4879
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	55.336	50.1976	dasypus_novemcinctus	ENSDNOP00000023589	67.3077	61.0577
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	48.6166	41.1067	erinaceus_europaeus	ENSEEUP00000012140	71.9298	60.8187
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	69.9605	60.0791	echinops_telfairi	ENSETEP00000006673	63.8989	54.8736
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	67.1937	64.8221	callithrix_jacchus	ENSCJAP00000083390	69.6721	67.2131
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	60.4743	58.1028	cercocebus_atys	ENSCATP00000016746	70.1835	67.4312
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	70.3557	65.2174	macaca_nemestrina	ENSMNEP00000015235	63.1206	58.5106
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	60.4743	57.3123	macaca_nemestrina	ENSMNEP00000039391	70.1835	66.5138
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	75.0988	72.7273	macaca_mulatta	ENSMMUP00000041218	74.8031	72.4409
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	71.9368	68.7747	mandrillus_leucophaeus	ENSMLEP00000016370	80.1762	76.652
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	65.6126	62.4506	vulpes_vulpes	ENSVVUP00000021431	67.4797	64.2276
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	66.0079	62.8458	equus_caballus	ENSECAP00000038629	66.2698	63.0952
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	84.1897	81.8182	mesocricetus_auratus	ENSMAUP00000009939	85.2	82.8
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	74.3083	71.1462	mesocricetus_auratus	ENSMAUP00000004575	85.8447	82.1918
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	60.8696	56.917	mesocricetus_auratus	ENSMAUP00000001284	77	72
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	62.0553	58.498	balaenoptera_musculus	ENSBMSP00010017819	66.8085	62.9787
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	71.9368	66.0079	dipodomys_ordii	ENSDORP00000027026	72.51	66.5339
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	69.5652	65.6126	rhinopithecus_bieti	ENSRBIP00000030734	82.243	77.5701
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	60.0791	51.7787	loxodonta_africana	ENSLAFP00000024485	69.7248	60.0917
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	53.3597	45.8498	loxodonta_africana	ENSLAFP00000023922	62.212	53.4562
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	69.9605	61.2648	loxodonta_africana	ENSLAFP00000022090	76.6234	67.0996
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	68.3794	62.0553	jaculus_jaculus	ENSJJAP00000004950	69.4779	63.0522
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	71.9368	66.4032	oryctolagus_cuniculus	ENSOCUP00000044222	80.1762	74.0088
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	64.4269	58.8933	oryctolagus_cuniculus	ENSOCUP00000042514	52.0767	47.6038
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	73.913	67.9842	phascolarctos_cinereus	ENSPCIP00000003203	83.1111	76.4444
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	81.0277	77.4704	saimiri_boliviensis_boliviensis	ENSSBOP00000002023	75.3676	72.0588
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	84.1897	79.8419	saimiri_boliviensis_boliviensis	ENSSBOP00000006721	82.2394	77.9923
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	43.8735	40.3162	mus_pahari	MGP_PahariEiJ_P0032823	78.7234	72.3404
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	64.8221	57.3123	nannospalax_galili	ENSNGAP00000010673	83.6735	73.9796
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	65.6126	62.8458	equus_asinus	ENSEASP00005020880	66.6667	63.8554
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	61.2648	55.7312	chinchilla_lanigera	ENSCLAP00000017360	69.1964	62.9464
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	57.7075	54.9407	chinchilla_lanigera	ENSCLAP00000001051	66.6667	63.4703
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	69.5652	66.0079	chinchilla_lanigera	ENSCLAP00000012246	72.7273	69.0083
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	81.8182	76.6798	chinchilla_lanigera	ENSCLAP00000007636	76.3838	71.5867
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	83.004	79.8419	aotus_nancymaae	ENSANAP00000039348	81.3953	78.2946
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	75.4941	71.5415	microcebus_murinus	ENSMICP00000037963	80.5907	76.3713
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	81.4229	77.0751	propithecus_coquereli	ENSPCOP00000005800	88.412	83.691
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	75.8893	70.751	propithecus_coquereli	ENSPCOP00000006008	63.7874	59.4684
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	61.6601	54.1502	panthera_tigris_altaica	ENSPTIP00000018919	71.5596	62.844
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	56.1265	51.7787	peromyscus_maniculatus_bairdii	ENSPEMP00000030564	65.4378	60.3687
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	61.2648	59.6838	tupaia_belangeri	ENSTBEP00000005781	92.2619	89.881
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	62.8458	59.2885	octodon_degus	ENSODEP00000004358	68.2403	64.3777
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	64.8221	60.8696	mus_spicilegus	ENSMSIP00000030845	69.7872	65.5319
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	66.4032	63.2411	mus_spicilegus	ENSMSIP00000001355	71.4894	68.0851
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	62.0553	57.3123	cavia_porcellus	ENSCPOP00000026921	80.9278	74.7423
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	84.585	81.8182	cricetulus_griseus_chok1gshd	ENSCGRP00001004846	82.6255	79.9228
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	86.166	82.6087	cricetulus_griseus_chok1gshd	ENSCGRP00001007158	90.8333	87.0833
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	72.332	68.7747	cricetulus_griseus_chok1gshd	ENSCGRP00001025049	74.3902	70.7317
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	61.6601	58.498	physeter_catodon	ENSPCTP00005006696	72.5581	68.8372
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	82.2134	78.2609	rattus_norvegicus	ENSRNOP00000004583	89.2704	84.9785
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	79.8419	73.1225	carlito_syrichta	ENSTSYP00000022871	86.3248	79.0598
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	83.3992	79.4466	carlito_syrichta	ENSTSYP00000031117	84.4	80.4
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	75.8893	70.3557	vombatus_ursinus	ENSVURP00010004747	78.3673	72.6531
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	82.2134	79.0514	ovis_aries_rambouillet	ENSOARP00020012614	75.9124	72.9927
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	60.4743	52.9644	myotis_lucifugus	ENSMLUP00000020020	72.8571	63.8095
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	71.1462	66.4032	sciurus_vulgaris	ENSSVLP00005027528	72.5806	67.7419
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	71.1462	67.1937	sciurus_vulgaris	ENSSVLP00005024872	67.1642	63.4328
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	66.0079	61.2648	microtus_ochrogaster	ENSMOCP00000010434	70.1681	65.1261
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	64.8221	60.8696	microtus_ochrogaster	ENSMOCP00000000264	70.3863	66.0944
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	62.8458	59.2885	microtus_ochrogaster	ENSMOCP00000010453	79.1045	74.6269
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	70.751	67.1937	rhinopithecus_roxellana	ENSRROP00000031413	78.1659	74.2358
ENSPPAG00000023840	pan_paniscus	ENSPPAP00000005886	64.4269	59.2885	cyprinus_carpio_carpio	ENSCCRP00000062998	73.7557	67.8733

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression