RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPNYG00000011117	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1685 bases	Strand	Plus strand
Position	JH419324.1 : 1577555 - 1579239	RNA binding domain	CYTH
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPNYP00000014662	CYTH	PF01928	4.1e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPNYT00000015034	477	158aa	ENSPNYP00000014662

Gene Model

Click here to download ENSPNYG00000011117's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPNYG00000011117's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPNYG00000011117

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPNYG00000011117	pundamilia_nyererei	ENSPNYP00000014662	60.1266	50.6329	gasterosteus_aculeatus	ENSGACP00000019351	54.5977	45.977
ENSPNYG00000011117	pundamilia_nyererei	ENSPNYP00000014662	37.9747	32.9114	sphenodon_punctatus	ENSSPUP00000000493	60	52
ENSPNYG00000011117	pundamilia_nyererei	ENSPNYP00000014662	39.8734	29.7468	naja_naja	ENSNNAP00000028277	55.7522	41.5929

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression