| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSPNYG00000000756 | Gene ID |
102194990 |
Accession |
- |
| Symbol |
lrpprc |
Alias |
- |
Full Name |
leucine rich pentatricopeptide repeat containing |
| Status |
Confidence |
Length |
57485 bases |
Strand |
Plus strand |
| Position |
JH419229.1 : 852345 - 909829 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSPNYP00000001107 |
PPR_3 |
PF13812 |
4.2e-27 |
1 |
| ENSPNYP00000001107 |
PPR_3 |
PF13812 |
4.2e-27 |
2 |
| ENSPNYP00000001107 |
PPR |
PF01535 |
2.3e-31 |
3 |
| ENSPNYP00000001107 |
PPR |
PF01535 |
2.3e-31 |
4 |
| ENSPNYP00000001107 |
PPR |
PF01535 |
2.3e-31 |
5 |
| ENSPNYP00000001107 |
PPR |
PF01535 |
2.3e-31 |
6 |
| ENSPNYP00000001107 |
PPR |
PF01535 |
2.3e-31 |
7 |
| ENSPNYP00000001123 |
PPR_3 |
PF13812 |
5.5e-17 |
1 |
| ENSPNYP00000001123 |
PPR_3 |
PF13812 |
5.5e-17 |
2 |
| ENSPNYP00000001123 |
PPR_long |
PF17177 |
2.1e-12 |
3 |
| ENSPNYP00000001123 |
PPR |
PF01535 |
4.1e-15 |
4 |
| ENSPNYP00000001123 |
PPR |
PF01535 |
4.1e-15 |
5 |
| ENSPNYP00000001123 |
PPR |
PF01535 |
4.1e-15 |
6 |
| ENSPNYP00000001133 |
PPR_3 |
PF13812 |
6.5e-17 |
1 |
| ENSPNYP00000001133 |
PPR_3 |
PF13812 |
6.5e-17 |
2 |
| ENSPNYP00000001133 |
PPR_long |
PF17177 |
2.1e-12 |
3 |
| ENSPNYP00000001133 |
PPR |
PF01535 |
4.8e-15 |
4 |
| ENSPNYP00000001133 |
PPR |
PF01535 |
4.8e-15 |
5 |
| ENSPNYP00000001133 |
PPR |
PF01535 |
4.8e-15 |
6 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| lrpprc-201 |
ENSPNYT00000001127 |
4029 |
1342aa |
ENSPNYP00000001107 |
| lrpprc-202 |
ENSPNYT00000001143 |
1506 |
501aa |
ENSPNYP00000001123 |
| lrpprc-203 |
ENSPNYT00000001152 |
1575 |
524aa |
ENSPNYP00000001133 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSPNYG00000000756 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 83.0849 | 71.7586 | fundulus_heteroclitus | ENSFHEP00000017838 | 78.4659 | 67.7692 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 81.2221 | 69.6721 | xiphophorus_maculatus | ENSXMAP00000018156 | 77.0318 | 66.0777 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 81.7437 | 69.9702 | oryzias_latipes | ENSORLP00000005797 | 76.2865 | 65.299 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 92.2504 | 90.462 | astatotilapia_calliptera | ENSACLP00000035182 | 94.6483 | 92.8135 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 84.7243 | 73.3979 | cyprinodon_variegatus | ENSCVAP00000026988 | 80.0141 | 69.3174 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 30.8495 | 26.5276 | oryzias_melastigma | ENSOMEP00000028638 | 80.5447 | 69.2607 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 85.0969 | 82.7869 | neolamprologus_brichardi | ENSNBRP00000017258 | 94.7718 | 92.1992 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 83.9046 | 77.0492 | amphilophus_citrinellus | ENSACIP00000012395 | 83.9046 | 77.0492 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 80.775 | 69.4486 | poecilia_formosa | ENSPFOP00000011667 | 76.7705 | 66.0057 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 80.775 | 68.927 | gasterosteus_aculeatus | ENSGACP00000014169 | 77.8177 | 66.4034 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 84.5007 | 74.4411 | amphiprion_ocellaris | ENSAOCP00000002732 | 79.3562 | 69.909 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 79.5082 | 67.1386 | tetraodon_nigroviridis | ENSTNIP00000010279 | 77.3749 | 65.3372 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 90.462 | 86.8852 | maylandia_zebra | ENSMZEP00005036721 | 84.8358 | 81.4815 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 80.8495 | 72.1311 | amphiprion_percula | ENSAPEP00000004420 | 78.7373 | 70.2467 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 77.2727 | 63.8599 | stegastes_partitus | ENSSPAP00000000169 | 71.914 | 59.4313 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 61.699 | 42.772 | petromyzon_marinus | ENSPMAP00000002368 | 63.0137 | 43.6834 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 17.2876 | 12.0715 | eptatretus_burgeri | ENSEBUP00000025786 | 59.9483 | 41.8605 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 73.6215 | 57.3025 | latimeria_chalumnae | ENSLACP00000015933 | 69.0426 | 53.7386 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 77.1237 | 60.1341 | lepisosteus_oculatus | ENSLOCP00000020256 | 70.2648 | 54.7862 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 74.1431 | 57.228 | danio_rerio | ENSDARP00000111776 | 68.104 | 52.5667 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 56.0358 | 41.2072 | choloepus_hoffmanni | ENSCHOP00000003231 | 54.2177 | 39.8702 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 50.9687 | 36.3636 | erinaceus_europaeus | ENSEEUP00000011323 | 53.1882 | 37.9471 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.7779 | 50.2981 | dasypus_novemcinctus | ENSDNOP00000009798 | 66.3551 | 48.5262 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 46.1252 | 32.4143 | dasypus_novemcinctus | ENSDNOP00000020662 | 58.1221 | 40.8451 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.2563 | 49.851 | echinops_telfairi | ENSETEP00000005410 | 65.7574 | 48.0258 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.927 | 50 | cercocebus_atys | ENSCATP00000003773 | 63.3128 | 45.9274 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.6289 | 50 | macaca_nemestrina | ENSMNEP00000015080 | 65.927 | 48.0315 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 67.6602 | 50.6706 | mustela_putorius_furo | ENSMPUP00000011706 | 64.9964 | 48.6757 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 66.2444 | 49.0313 | tursiops_truncatus | ENSTTRP00000006060 | 63.8191 | 47.2362 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 67.1386 | 48.5097 | loxodonta_africana | ENSLAFP00000019681 | 64.3112 | 46.4668 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 51.4158 | 38.003 | procavia_capensis | ENSPCAP00000001447 | 50.2183 | 37.1179 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 69.1505 | 50.5961 | capra_hircus | ENSCHIP00000022836 | 66.7146 | 48.8138 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 57.1535 | 40.7601 | ochotona_princeps | ENSOPRP00000015336 | 55.4191 | 39.5231 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.1818 | 48.9568 | cricetulus_griseus_chok1gshd | ENSCGRP00001015743 | 65.7328 | 47.1983 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 60.2832 | 42.2504 | cavia_porcellus | ENSCPOP00000000178 | 67.2485 | 47.1322 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 44.7839 | 31.8182 | pelodiscus_sinensis | ENSPSIP00000007632 | 69.2396 | 49.1936 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 11.1773 | 9.83607 | pelodiscus_sinensis | ENSPSIP00000017651 | 64.1026 | 56.4103 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.6289 | 50.2235 | otolemur_garnettii | ENSOGAP00000011476 | 66.1163 | 48.3848 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.0328 | 48.9568 | chinchilla_lanigera | ENSCLAP00000007399 | 65.4011 | 47.063 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 62.5931 | 46.1252 | vicugna_pacos | ENSVPAP00000008367 | 62.6398 | 46.1596 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 69.0015 | 50.2981 | ictidomys_tridecemlineatus | ENSSTOP00000029316 | 64.6197 | 47.104 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 59.389 | 42.921 | sorex_araneus | ENSSARP00000000394 | 67.8298 | 49.0213 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 69.2996 | 50.5216 | myotis_lucifugus | ENSMLUP00000009670 | 66.6667 | 48.6021 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 69.076 | 50.149 | chlorocebus_sabaeus | ENSCSAP00000009186 | 66.309 | 48.1402 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 67.6602 | 49.0313 | nomascus_leucogenys | ENSNLEP00000020435 | 65.8448 | 47.7157 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.1073 | 50.2981 | panthera_tigris_altaica | ENSPTIP00000000544 | 65.5667 | 48.4218 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 68.4799 | 50.0745 | microtus_ochrogaster | ENSMOCP00000006424 | 66.0201 | 48.2759 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 67.0641 | 49.2548 | pteropus_vampyrus | ENSPVAP00000001898 | 64.5624 | 47.4175 |
| ENSPNYG00000000756 | pundamilia_nyererei | ENSPNYP00000001107 | 24.5156 | 10.2086 | saccharomyces_cerevisiae | YLR067C | 34.0933 | 14.1969 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
