RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPMGG00000016486	Gene ID	431751	Accession	-
Symbol		Alias	-	Full Name	PRP18 pre-mRNA processing factor 18 homolog (yeast)
Status	Confidence	Length	6887 bases	Strand	Plus strand
Position	KN463998.1 : 315824 - 322710	RNA binding domain	PRP4 , Prp18
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPMGP00000020386	PRP4	PF08799	3.7e-13	1
ENSPMGP00000020386	Prp18	PF02840	7.1e-62	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPMGT00000021716	975	324aa	ENSPMGP00000020386

Gene Model

Click here to download ENSPMGG00000016486's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPMGG00000016486's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMGG00000016486

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMGG00000016486

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression