RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPMGG00000006430	Gene ID	553648	Accession	-
Symbol		Alias	-	Full Name	integrator complex subunit 11
Status	Confidence	Length	8199 bases	Strand	Minus strand
Position	KN464870.1 : 269853 - 278051	RNA binding domain	Lactamase_B , Beta-Casp , RMMBL
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPMGP00000007756	Lactamase_B	PF00753	1.3e-11	1
ENSPMGP00000007756	Beta-Casp	PF10996	8.2e-26	2
ENSPMGP00000007756	RMMBL	PF07521	3.7e-16	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPMGT00000008252	1809	602aa	ENSPMGP00000007756

Gene Model

Click here to download ENSPMGG00000006430's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPMGG00000006430's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMGG00000006430

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMGG00000006430

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression