Description

Ensembl ID ENSPMGG00000006236 Gene ID Accession -
Symbol Alias - Full Name interferon induced with helicase C domain 1
Status Confidence Length 24320 bases Strand Plus strand
Position KN465473.1 : 123908 - 148227 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPMGP00000007573 ResIII PF04851 1.4e-19 1
ENSPMGP00000007573 DEAD PF00270 1e-18 2
ENSPMGP00000007573 RIG-I_C PF18119 2.4e-32 3
ENSPMGP00000007573 RIG-I_C-RD PF11648 2.5e-17 4
ENSPMGP00000007572 ResIII PF04851 1.4e-19 1
ENSPMGP00000007572 DEAD PF00270 9.9e-19 2
ENSPMGP00000007572 RIG-I_C PF18119 2.2e-27 3
ENSPMGP00000007572 RIG-I_C-RD PF11648 1.7e-17 4
ENSPMGP00000007568 ResIII PF04851 1.5e-19 1
ENSPMGP00000007568 DEAD PF00270 1.3e-18 2
ENSPMGP00000007568 RIG-I_C PF18119 1.5e-32 3
ENSPMGP00000007564 ResIII PF04851 2.1e-19 1
ENSPMGP00000007564 DEAD PF00270 1.8e-18 2
ENSPMGP00000007564 RIG-I_C PF18119 5.9e-35 3
ENSPMGP00000007564 RIG-I_C-RD PF11648 4.8e-36 4
ENSPMGP00000007570 ResIII PF04851 2.8e-17 1
ENSPMGP00000007570 DEAD PF00270 3.3e-17 2
ENSPMGP00000007570 RIG-I_C PF18119 1.3e-29 3
ENSPMGP00000007570 RIG-I_C-RD PF11648 2.3e-22 4
ENSPMGP00000007570 RIG-I_C-RD PF11648 2.3e-22 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPMGT00000008049 2850 949aa ENSPMGP00000007564
- ENSPMGT00000008053 1884 627aa ENSPMGP00000007568
- ENSPMGT00000008055 2034 677aa ENSPMGP00000007570
- ENSPMGT00000008057 1968 655aa ENSPMGP00000007572
- ENSPMGT00000008058 2001 666aa ENSPMGP00000007573

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPMGG00000006236

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPMGG00000006236

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression