RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPMAG00000006921	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	18247 bases	Strand	Plus strand
Position	GL476395 : 350535 - 368781	RNA binding domain	Leo1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPMAP00000007643	Leo1	PF04004	3.8e-54	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPMAT00000007677	2325	684aa	ENSPMAP00000007643

Gene Model

Click here to download ENSPMAG00000006921's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPMAG00000006921's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMAG00000006921

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMAG00000006921	petromyzon_marinus	ENSPMAP00000007643	11.5497	7.45614	ciona_intestinalis	ENSCINP00000017068	60.3053	38.9313
ENSPMAG00000006921	petromyzon_marinus	ENSPMAP00000007643	70.3216	56.2865	lepisosteus_oculatus	ENSLOCP00000016448	73.773	59.0491
ENSPMAG00000006921	petromyzon_marinus	ENSPMAP00000007643	60.2339	50.2924	anabas_testudineus	ENSATEP00000024912	74.7731	62.4319
ENSPMAG00000006921	petromyzon_marinus	ENSPMAP00000007643	68.1287	55.848	denticeps_clupeoides	ENSDCDP00000046429	72.5857	59.5016

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression