RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPMAG00000000738	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	6336 bases	Strand	Minus strand
Position	GL483865 : 282 - 6617	RNA binding domain	RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPMAP00000000818	RRM_1	PF00076	2.3e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPMAT00000000820	537	179aa	ENSPMAP00000000818

Gene Model

Click here to download ENSPMAG00000000738's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPMAG00000000738's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMAG00000000738

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPMAG00000000738	petromyzon_marinus	ENSPMAP00000000818	59.2179	53.6313	monodon_monoceros	ENSMMNP00015008388	50.9615	46.1538
ENSPMAG00000000738	petromyzon_marinus	ENSPMAP00000000818	69.2737	55.3073	sinocyclocheilus_grahami	ENSSGRP00000023340	57.1429	45.6221

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression