RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPLOG00000020883	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1036 bases	Strand	Minus strand
Position	F2 : 52971239 - 52972274	RNA binding domain	Ribosomal_S8e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPLOP00000028506	Ribosomal_S8e	PF01201	6.6e-32	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPLOT00000031483	1036	253aa	ENSPLOP00000028506

Gene Model

Click here to download ENSPLOG00000020883's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPLOG00000020883's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000020883	panthera_leo	ENSPLOP00000020929	84.4622	82.0717	panthera_leo	ENSPLOP00000028506	83.7945	81.4229
ENSPLOG00000020883	panthera_leo	ENSPLOP00000000958	73.9316	70.5128	panthera_leo	ENSPLOP00000028506	68.3794	65.2174
ENSPLOG00000020883	panthera_leo	ENSPLOP00000017739	90.6863	87.7451	panthera_leo	ENSPLOP00000028506	73.1225	70.751
ENSPLOG00000020883	panthera_leo	ENSPLOP00000003539	90.3846	88.4615	panthera_leo	ENSPLOP00000028506	92.8854	90.9091

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	93.2806	90.5138	ornithorhynchus_anatinus	ENSOANP00000036273	87.4074	84.8148
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	44.664	40.3162	notamacropus_eugenii	ENSMEUP00000002775	57.9487	52.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	93.6759	91.6996	camelus_dromedarius	ENSCDRP00005003748	85.8696	84.058
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	90.1186	neovison_vison	ENSNVIP00000017629	90.2724	88.716
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	79.8419	74.7036	rhinopithecus_bieti	ENSRBIP00000003429	88.9868	83.2599
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	65.2174	63.6364	ictidomys_tridecemlineatus	ENSSTOP00000007121	96.4912	94.152
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	78.6561	61.6601	caenorhabditis_elegans	W09C5.1.1	76.834	60.2317
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	80.2372	67.5889	drosophila_melanogaster	FBpp0304031	78.3784	66.0232
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	88.1423	78.6561	ciona_intestinalis	ENSCINP00000036096	85.7692	76.5385
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	88.5376	79.8419	eptatretus_burgeri	ENSEBUP00000015222	86.1538	77.6923
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	callorhinchus_milii	ENSCMIP00000043552	88.8462	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	88.1423	latimeria_chalumnae	ENSLACP00000004768	90.3846	85.7692
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	87.747	lepisosteus_oculatus	ENSLOCP00000006484	89.6154	85.3846
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	83.004	clupea_harengus	ENSCHAP00000057564	70.8978	65.0155
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	72.332	66.7984	clupea_harengus	ENSCHAP00000057229	83.1818	76.8182
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.9802	danio_rerio	ENSDARP00000003036	88.4615	82.6923
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	84.9802	carassius_auratus	ENSCARP00000082772	87.4046	82.0611
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	85.3755	carassius_auratus	ENSCARP00000107366	88.8462	83.0769
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.9802	carassius_auratus	ENSCARP00000018973	84.2491	78.7546
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.9565	astyanax_mexicanus	ENSAMXP00000044836	89.2308	84.6154
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	84.585	ictalurus_punctatus	ENSIPUP00000009453	89.2308	82.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	84.9802	electrophorus_electricus	ENSEEEP00000012943	88.8462	82.6923
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.1897	esox_lucius	ENSELUP00000027026	88.4615	81.9231
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.004	oncorhynchus_kisutch	ENSOKIP00005088133	87.3563	80.4598
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	83.3992	oncorhynchus_kisutch	ENSOKIP00005072288	88.0769	81.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	83.3992	oncorhynchus_mykiss	ENSOMYP00000000743	77.3649	71.2838
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.004	oncorhynchus_mykiss	ENSOMYP00000122343	86.0377	79.2453
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	83.3992	salmo_salar	ENSSSAP00000160255	85.8209	78.7313
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	83.3992	salmo_salar	ENSSSAP00000087472	88.0769	81.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	83.3992	salmo_trutta	ENSSTUP00000081058	88.0769	81.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.004	salmo_trutta	ENSSTUP00000049222	78.6207	72.4138
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.585	gadus_morhua	ENSGMOP00000047952	88.4615	82.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	66.4032	59.2885	gadus_morhua	ENSGMOP00000003379	76.0181	67.8733
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.166	fundulus_heteroclitus	ENSFHEP00000024574	89.2308	83.8462
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	84.9802	79.4466	poecilia_reticulata	ENSPREP00000031104	88.843	83.0579
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.7708	xiphophorus_maculatus	ENSXMAP00000000759	89.2308	83.4615
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.166	oryzias_latipes	ENSORLP00000004198	89.2308	83.8462
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	oreochromis_niloticus	ENSONIP00000028063	88.8462	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	haplochromis_burtoni	ENSHBUP00000009404	79.3814	75.2577
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	astatotilapia_calliptera	ENSACLP00000040773	79.3814	75.2577
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.585	sparus_aurata	ENSSAUP00010036131	79.8611	74.3056
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.166	lates_calcarifer	ENSLCAP00010044434	89.2308	83.8462
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.1423	xenopus_tropicalis	ENSXETP00000011074	90	85.7692
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	88.9328	chrysemys_picta_bellii	ENSCPBP00000001048	90.3846	86.5385
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	86.9565	crocodylus_porosus	ENSCPRP00005000809	90.3846	84.6154
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.5376	notechis_scutatus	ENSNSUP00000014259	90	86.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	86.166	82.6087	sphenodon_punctatus	ENSSPUP00000000770	90.0826	86.3636
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	88.1423	laticauda_laticaudata	ENSLLTP00000021623	89.5753	86.1004
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.5376	pseudonaja_textilis	ENSPTXP00000003596	90	86.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	88.1423	anas_platyrhynchos_platyrhynchos	ENSAPLP00000022397	64.8876	62.6404
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.1423	gallus_gallus	ENSGALP00010014423	88.6364	84.4697
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	85.7708	82.2134	serinus_canaria	ENSSCAP00000006188	83.7838	80.3089
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.5376	meleagris_gallopavo	ENSMGAP00000005358	88.6364	84.8485
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.5376	parus_major	ENSPMJP00000021775	90	86.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	88.1423	geospiza_fortis	ENSGFOP00000018291	44.2966	42.3954
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	87.3518	pygocentrus_nattereri	ENSPNAP00000010679	89.2308	85
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.3755	poecilia_latipinna	ENSPLAP00000026690	89.2308	83.0769
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	86.9565	tetraodon_nigroviridis	ENSTNIP00000016434	89.6154	84.6154
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.5376	taeniopygia_guttata	ENSTGUP00000006215	90	86.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.9328	naja_naja	ENSNNAP00000009162	90	86.5385
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	84.9802	scophthalmus_maximus	ENSSMAP00000017535	89.2308	82.6923
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.7708	seriola_dumerili	ENSSDUP00000029499	89.2308	83.4615
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.166	cyprinodon_variegatus	ENSCVAP00000008277	88.8462	83.8462
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	84.9802	79.8419	amphilophus_citrinellus	ENSACIP00000004278	88.843	83.4711
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	86.9565	erpetoichthys_calabaricus	ENSECRP00000023930	89.6154	84.6154
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	88.9328	pelodiscus_sinensis	ENSPSIP00000014434	90.3846	86.5385
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	neolamprologus_brichardi	ENSNBRP00000011751	88.8462	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	85.3755	oryzias_javanicus	ENSOJAP00000025049	90.5882	84.7059
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	85.3755	dicentrarchus_labrax	ENSDLAP00005080768	79.7945	73.9726
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	85.7708	acanthochromis_polyacanthus	ENSAPOP00000004283	88.5057	83.1418
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.5613	mastacembelus_armatus	ENSMAMP00000041413	89.2308	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.5613	stegastes_partitus	ENSSPAP00000006704	89.2308	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.5613	stegastes_partitus	ENSSPAP00000018731	89.2308	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	84.585	anabas_testudineus	ENSATEP00000015721	89.6154	82.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	88.1423	strigops_habroptila	ENSSHBP00005025252	90.3846	85.7692
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.166	amphiprion_percula	ENSAPEP00000000511	85.2399	80.4428
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	84.585	betta_splendens	ENSBSLP00000029044	89.5753	82.6255
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.9328	anser_brachyrhynchus	ENSABRP00000000368	90	86.5385
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.585	denticeps_clupeoides	ENSDCDP00000015974	88.4615	82.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	86.5613	83.7945	leptobrachium_leishanense	ENSLLEP00000038049	83.908	81.2261
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	89.3281	anolis_carolinensis	ENSACAP00000040052	85.348	82.7839
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.5613	amphiprion_ocellaris	ENSAOCP00000026245	89.2308	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	86.5613	nothobranchius_furzeri	ENSNFUP00015036896	89.6154	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	70.3557	56.1265	saccharomyces_cerevisiae	YER126C	68.1992	54.4061
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	84.9802	seriola_lalandi_dorsalis	ENSSLDP00000019263	88.5057	82.3755
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.585	sinocyclocheilus_grahami	ENSSGRP00000049465	88.4615	82.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	84.1897	78.6561	sinocyclocheilus_grahami	ENSSGRP00000093709	88.0165	82.2314
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	pundamilia_nyererei	ENSPNYP00000002577	88.8462	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	86.9565	struthio_camelus_australis	ENSSCUP00000025977	89.9614	84.9421
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	paramormyrops_kingsleyae	ENSPKIP00000000032	88.8462	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.166	oryzias_melastigma	ENSOMEP00000029812	89.2308	83.8462
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	86.5613	maylandia_zebra	ENSMZEP00005005748	88.8462	84.2308
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.7708	larimichthys_crocea	ENSLCRP00005013315	89.2308	83.4615
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	88.9328	chelonoidis_abingdonii	ENSCABP00000019412	91.0156	87.8906
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.7708	oryzias_sinensis	ENSOSIP00000010576	89.2308	83.4615
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.3043	84.9802	labrus_bergylta	ENSLBEP00000026704	88.8462	82.6923
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	57.3123	49.0119	labrus_bergylta	ENSLBEP00000000004	75.1295	64.2487
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	88.5376	coturnix_japonica	ENSCJPP00005001824	90	86.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	83.004	cottoperca_gobio	ENSCGOP00000010838	88.4615	80.7692
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.004	oncorhynchus_tshawytscha	ENSOTSP00005050818	87.3563	80.4598
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.5138	83.3992	oncorhynchus_tshawytscha	ENSOTSP00005085315	88.0769	81.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.4901	86.5613	takifugu_rubripes	ENSTRUP00000054063	87.6404	82.0225
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	88.5376	aquila_chrysaetos_chrysaetos	ENSACCP00020015419	48.1405	46.281
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	90.1186	salvator_merianae	ENSSMRP00000007302	90.3846	87.6923
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.3992	gasterosteus_aculeatus	ENSGACP00000020976	87.6923	81.1538
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.0949	85.3755	kryptolebias_marmoratus	ENSKMAP00000017776	89.6154	83.0769
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	84.1897	cyprinus_carpio_carpio	ENSCCRP00000176874	85.3933	79.7753
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.9091	84.585	cyprinus_carpio_carpio	ENSCCRP00000073607	88.4615	82.3077
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	86.166	80.2372	scleropages_formosus	ENSSFOP00015025184	79.8535	74.359
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	84.9802	79.8419	cynoglossus_semilaevis	ENSCSEP00000020621	88.843	83.4711
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.3755	poecilia_formosa	ENSPFOP00000012522	89.2308	83.0769
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	89.7233	82.6087	hippocampus_comes	ENSHCOP00000006430	85.0187	78.2772
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	86.166	myripristis_murdjan	ENSMMDP00005046977	89.2308	83.8462
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	86.166	82.6087	ficedula_albicollis	ENSFALP00000010527	89.7119	86.0082
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	91.6996	85.3755	sander_lucioperca	ENSSLUP00000054560	89.2308	83.0769
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	88.9328	terrapene_carolina_triunguis	ENSTMTP00000014914	90.3846	86.5385
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.004	hucho_hucho	ENSHHUP00000000558	70.8075	65.2174
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	90.1186	83.3992	hucho_hucho	ENSHHUP00000031956	85.7143	79.3233
ENSPLOG00000020883	panthera_leo	ENSPLOP00000028506	92.8854	89.3281	gopherus_evgoodei	ENSGEVP00005003377	90.3846	86.9231

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression