RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPLOG00000016509	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1274 bases	Strand	Minus strand
Position	D4 : 7490658 - 7491931	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPLOP00000022540	Ribosomal_L37ae	PF01780	2.8e-28	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPLOT00000024893	210	69aa	ENSPLOP00000022540

Gene Model

Click here to download ENSPLOG00000016509's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPLOG00000016509's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000016509	panthera_leo	ENSPLOP00000019880	37.2549	34.3137	panthera_leo	ENSPLOP00000022540	55.0725	50.7246
ENSPLOG00000016509	panthera_leo	ENSPLOP00000015580	60.4396	54.9451	panthera_leo	ENSPLOP00000022540	79.7101	72.4638
ENSPLOG00000016509	panthera_leo	ENSPLOP00000029839	64.1304	59.7826	panthera_leo	ENSPLOP00000022540	85.5072	79.7101

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	sarcophilus_harrisii	ENSSHAP00000041769	51.3274	47.7876
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	73.913	dasypus_novemcinctus	ENSDNOP00000028113	58.6957	55.4348
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	callithrix_jacchus	ENSCJAP00000084516	47.9675	44.7154
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	macaca_mulatta	ENSMMUP00000047768	49.1667	45.8333
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	73.913	papio_anubis	ENSPANP00000040786	79.1667	70.8333
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	81.1594	71.0145	mandrillus_leucophaeus	ENSMLEP00000014893	64.3678	56.3218
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	62.3188	56.5217	pan_paniscus	ENSPPAP00000037771	71.6667	65
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	69.5652	62.3188	pan_troglodytes	ENSPTRP00000093619	62.3377	55.8442
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	56.5217	52.1739	vulpes_vulpes	ENSVVUP00000036984	38.2353	35.2941
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	79.7101	73.913	vulpes_vulpes	ENSVVUP00000034144	75.3425	69.863
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	75.3623	canis_lupus_familiaris	ENSCAFP00845026247	72.1519	65.8228
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	55.0725	52.1739	canis_lupus_familiaris	ENSCAFP00845016142	41.3043	39.1304
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	81.1594	75.3623	canis_lupus_familiaris	ENSCAFP00845025122	71.7949	66.6667
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	79.7101	72.4638	ursus_americanus	ENSUAMP00000013106	69.6203	63.2911
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	ailuropoda_melanoleuca	ENSAMEP00000024358	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	mustela_putorius_furo	ENSMPUP00000016385	25.431	23.7069
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	88.4058	81.1594	mus_spicilegus	ENSMSIP00000005472	71.7647	65.8824
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	aotus_nancymaae	ENSANAP00000013222	72.5	67.5
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	56.5217	47.8261	marmota_marmota_marmota	ENSMMMP00000025327	65	55
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	81.1594	75.3623	delphinapterus_leucas	ENSDLEP00000008765	57.1429	53.0612
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	camelus_dromedarius	ENSCDRP00005016922	63.3333	58.8889
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	79.7101	71.0145	equus_asinus	ENSEASP00005024349	78.5714	70
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	56.5217	50.7246	octodon_degus	ENSODEP00000013262	65	58.3333
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	loxodonta_africana	ENSLAFP00000024159	63.7363	59.3407
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	68.1159	cavia_porcellus	ENSCPOP00000027907	49.5413	43.1193
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	ovis_aries_rambouillet	ENSOARP00020009900	66.6667	62.069
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	ovis_aries_rambouillet	ENSOARP00020023040	70.7317	65.8537
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	71.0145	sus_scrofa	ENSSSCP00000078637	65.0602	59.0361
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	microcebus_murinus	ENSMICP00000038552	60.4167	56.25
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	72.4638	68.1159	rattus_norvegicus	ENSRNOP00000085402	84.7458	79.661
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	81.1594	saimiri_boliviensis_boliviensis	ENSSBOP00000025689	69.4118	65.8824
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	73.913	68.1159	neovison_vison	ENSNVIP00000021424	63.75	58.75
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	pteropus_vampyrus	ENSPVAP00000005767	63.7363	59.3407
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	86.9565	78.2609	nomascus_leucogenys	ENSNLEP00000047088	73.1707	65.8537
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	95.6522	92.7536	felis_catus	ENSFCAP00000036665	75	72.7273
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	73.913	balaenoptera_musculus	ENSBMSP00010030043	53.271	47.6636
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	71.0145	rhinopithecus_bieti	ENSRBIP00000005006	49.5413	44.9541
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	sciurus_vulgaris	ENSSVLP00005018272	72.1519	67.0886
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	56.5217	50.7246	rhinopithecus_roxellana	ENSRROP00000035531	69.6429	62.5
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	78.2609	capra_hircus	ENSCHIP00000017821	72.1519	68.3544
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	60.8696	55.0725	urocitellus_parryii	ENSUPAP00010008086	68.8525	62.2951
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	81.1594	72.4638	monodon_monoceros	ENSMMNP00015028851	74.6667	66.6667
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	86.9565	81.1594	microtus_ochrogaster	ENSMOCP00000002350	62.5	58.3333
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	phocoena_sinus	ENSPSNP00000025587	55.2381	51.4286
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	55.0725	52.1739	canis_lupus_dingo	ENSCAFP00020009512	41.3043	39.1304
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	81.1594	75.3623	moschus_moschiferus	ENSMMSP00000003536	75.6757	70.2703
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	86.9565	82.6087	phascolarctos_cinereus	ENSPCIP00000038374	78.9474	75
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	prolemur_simus	ENSPSMP00000035209	60.4167	56.25
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	71.0145	ursus_maritimus	ENSUMAP00000026899	68.3544	62.0253
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	75.3623	62.3188	peromyscus_maniculatus_bairdii	ENSPEMP00000036937	56.5217	46.7391
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	catagonus_wagneri	ENSCWAP00000016301	71.0843	66.2651
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	76.8116	bos_mutus	ENSBMUP00000012828	75.3247	68.8312
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	petromyzon_marinus	ENSPMAP00000000001	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	76.8116	eptatretus_burgeri	ENSEBUP00000008712	47.541	43.4426
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	callorhinchus_milii	ENSCMIP00000038383	28.4314	26.4706
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	latimeria_chalumnae	ENSLACP00000013146	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	clupea_harengus	ENSCHAP00000043701	54.6296	50.9259
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	78.2609	danio_rerio	ENSDARP00000149337	64.1304	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	carassius_auratus	ENSCARP00000007525	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	76.8116	carassius_auratus	ENSCARP00000020048	59.1837	54.0816
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	76.8116	carassius_auratus	ENSCARP00000127999	59.1837	54.0816
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	astyanax_mexicanus	ENSAMXP00000044376	61.9565	57.6087
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	ictalurus_punctatus	ENSIPUP00000032395	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	78.2609	electrophorus_electricus	ENSEEEP00000002593	60	56.8421
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	esox_lucius	ENSELUP00000034166	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	salmo_salar	ENSSSAP00000168002	13.3484	12.4434
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	gadus_morhua	ENSGMOP00000047570	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	fundulus_heteroclitus	ENSFHEP00000016949	61.9565	57.6087
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	poecilia_reticulata	ENSPREP00000031565	60.6383	56.383
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	xiphophorus_maculatus	ENSXMAP00000022527	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	oryzias_latipes	ENSORLP00000014370	63.3333	58.8889
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	cyclopterus_lumpus	ENSCLMP00005030659	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	57.971	53.6232	oreochromis_niloticus	ENSONIP00000032425	58.8235	54.4118
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	haplochromis_burtoni	ENSHBUP00000034754	63.3333	58.8889
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	astatotilapia_calliptera	ENSACLP00000026553	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	75.3623	sparus_aurata	ENSSAUP00010064465	61.9565	56.5217
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	78.2609	chrysemys_picta_bellii	ENSCPBP00000018679	70.2381	64.2857
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	69.5652	crocodylus_porosus	ENSCPRP00005027404	73.9726	65.7534
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	76.8116	anas_platyrhynchos_platyrhynchos	ENSAPLP00000009541	78.3784	71.6216
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	pygocentrus_nattereri	ENSPNAP00000001238	37.3418	34.8101
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	poecilia_latipinna	ENSPLAP00000016918	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	tetraodon_nigroviridis	ENSTNIP00000010730	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	78.2609	72.4638	naja_naja	ENSNNAP00000006425	67.5	62.5
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	scophthalmus_maximus	ENSSMAP00000021009	60	55.7895
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	seriola_dumerili	ENSSDUP00000002450	63.7363	59.3407
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	cyprinodon_variegatus	ENSCVAP00000013185	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	57.971	53.6232	amphilophus_citrinellus	ENSACIP00000013169	38.835	35.9223
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	neolamprologus_brichardi	ENSNBRP00000020778	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	oryzias_javanicus	ENSOJAP00000027733	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	acanthochromis_polyacanthus	ENSAPOP00000026370	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	mastacembelus_armatus	ENSMAMP00000047072	35.625	33.125
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	stegastes_partitus	ENSSPAP00000004318	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	57.971	53.6232	anabas_testudineus	ENSATEP00000054710	58.8235	54.4118
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	amphiprion_percula	ENSAPEP00000030792	38.255	35.5705
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	betta_splendens	ENSBSLP00000050988	61.9565	57.6087
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	denticeps_clupeoides	ENSDCDP00000000987	60.4167	56.25
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	76.8116	leptobrachium_leishanense	ENSLLEP00000007026	29.2929	26.7677
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	76.8116	66.6667	anolis_carolinensis	ENSACAP00000005447	58.2418	50.5494
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	amphiprion_ocellaris	ENSAOCP00000023850	38.7755	36.0544
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	57.971	53.6232	nothobranchius_furzeri	ENSNFUP00015025358	58.8235	54.4118
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	seriola_lalandi_dorsalis	ENSSLDP00000005195	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	78.2609	sinocyclocheilus_grahami	ENSSGRP00000067018	64.1304	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	pundamilia_nyererei	ENSPNYP00000022426	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	oryzias_melastigma	ENSOMEP00000028375	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	maylandia_zebra	ENSMZEP00005014902	63.3333	58.8889
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	larimichthys_crocea	ENSLCRP00005034140	61.9565	57.6087
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	oryzias_sinensis	ENSOSIP00000014190	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	cottoperca_gobio	ENSCGOP00000025482	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	59.4203	55.0725	oncorhynchus_tshawytscha	ENSOTSP00005012992	63.0769	58.4615
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	57.971	53.6232	takifugu_rubripes	ENSTRUP00000008111	51.2821	47.4359
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	gasterosteus_aculeatus	ENSGACP00000016501	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	kryptolebias_marmoratus	ENSKMAP00000025927	53.6364	50
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	86.9565	79.7101	cyprinus_carpio_carpio	ENSCCRP00000041052	48.3871	44.3548
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	82.6087	76.8116	cynoglossus_semilaevis	ENSCSEP00000013732	61.9565	57.6087
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	poecilia_formosa	ENSPFOP00000014682	63.0435	58.6957
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	hippocampus_comes	ENSHCOP00000011939	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	85.5072	79.7101	myripristis_murdjan	ENSMMDP00005031860	64.1304	59.7826
ENSPLOG00000016509	panthera_leo	ENSPLOP00000022540	84.058	78.2609	sander_lucioperca	ENSSLUP00000008945	63.0435	58.6957

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression