RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPLOG00000016059	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	183 bases	Strand	Plus strand
Position	E1 : 6047411 - 6047593	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPLOP00000021907	Ribosomal_L37ae	PF01780	2.4e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPLOT00000024194	183	60aa	ENSPLOP00000021907

Gene Model

Click here to download ENSPLOG00000016059's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPLOG00000016059's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000016059

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	40	28.3333	physeter_catodon	ENSPCTP00005007934	20.339	14.4068
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	58.3333	48.3333	delphinapterus_leucas	ENSDLEP00000016733	33.9806	28.1553
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	65	58.3333	sus_scrofa	ENSSSCP00000081296	72.2222	64.8148
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	50	38.3333	sus_scrofa	ENSSSCP00000077740	33.3333	25.5556
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	63.3333	51.6667	bos_taurus	ENSBTAP00000060778	56.7164	46.2687
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	58.3333	48.3333	monodon_monoceros	ENSMMNP00015002020	36.4583	30.2083
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	58.3333	48.3333	phocoena_sinus	ENSPSNP00000003759	36.4583	30.2083
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	56.6667	46.6667	cervus_hanglu_yarkandensis	ENSCHYP00000020198	40.9639	33.7349
ENSPLOG00000016059	panthera_leo	ENSPLOP00000021907	61.6667	58.3333	phascolarctos_cinereus	ENSPCIP00000015040	52.8571	50

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression