RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPLOG00000009182	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	924 bases	Strand	Minus strand
Position	VOCV01000266.1 : 366613 - 367536	RNA binding domain	Ribosomal_S27e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPLOP00000012495	Ribosomal_S27e	PF01667	2.1e-30	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPLOT00000013875	255	84aa	ENSPLOP00000012495

Gene Model

Click here to download ENSPLOG00000009182's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPLOG00000009182's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000009182	panthera_leo	ENSPLOP00000020549	82	79	panthera_leo	ENSPLOP00000012495	97.619	94.0476
ENSPLOG00000009182	panthera_leo	ENSPLOP00000028846	87.9518	81.9277	panthera_leo	ENSPLOP00000012495	86.9048	80.9524
ENSPLOG00000009182	panthera_leo	ENSPLOP00000003308	88.0952	82.1429	panthera_leo	ENSPLOP00000012495	88.0952	82.1429
ENSPLOG00000009182	panthera_leo	ENSPLOP00000020587	92.7711	84.3373	panthera_leo	ENSPLOP00000012495	91.6667	83.3333
ENSPLOG00000009182	panthera_leo	ENSPLOP00000006115	79.798	77.7778	panthera_leo	ENSPLOP00000012495	94.0476	91.6667
ENSPLOG00000009182	panthera_leo	ENSPLOP00000011669	71.4286	70.3297	panthera_leo	ENSPLOP00000012495	77.381	76.1905
ENSPLOG00000009182	panthera_leo	ENSPLOP00000021290	80	76.8421	panthera_leo	ENSPLOP00000012495	90.4762	86.9048

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	ornithorhynchus_anatinus	ENSOANP00000038462	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	erinaceus_europaeus	ENSEEUP00000014047	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	96.4286	callithrix_jacchus	ENSCJAP00000018220	100	97.5904
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	95.2381	94.0476	cercocebus_atys	ENSCATP00000013077	76.1905	75.2381
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	97.619	cercocebus_atys	ENSCATP00000006662	98.8095	97.619
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	macaca_fascicularis	ENSMFAP00000007327	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	94.0476	92.8571	macaca_mulatta	ENSMMUP00000070750	75.2381	74.2857
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	95.2381	macaca_nemestrina	ENSMNEP00000004319	96.4286	95.2381
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	98.8095	papio_anubis	ENSPANP00000028333	53.5032	52.8662
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	mandrillus_leucophaeus	ENSMLEP00000018016	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	98.8095	mandrillus_leucophaeus	ENSMLEP00000003965	98.8095	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	98.8095	pan_paniscus	ENSPPAP00000003130	100	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	97.619	pan_troglodytes	ENSPTRP00000066134	98.8095	97.619
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	98.8095	pan_troglodytes	ENSPTRP00000081657	100	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	canis_lupus_familiaris	ENSCAFP00845022696	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	mus_spicilegus	ENSMSIP00000033205	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	dipodomys_ordii	ENSDORP00000001490	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	98.8095	aotus_nancymaae	ENSANAP00000001832	100	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	marmota_marmota_marmota	ENSMMMP00000019971	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	91.6667	camelus_dromedarius	ENSCDRP00005016876	96.4286	91.6667
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	97.619	octodon_degus	ENSODEP00000026681	98.8095	97.619
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	97.619	95.2381	octodon_degus	ENSODEP00000026752	97.619	95.2381
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	98.8095	octodon_degus	ENSODEP00000025535	100	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	95.2381	octodon_degus	ENSODEP00000026448	76.4151	75.4717
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	otolemur_garnettii	ENSOGAP00000002751	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	96.4286	cricetulus_griseus_chok1gshd	ENSCGRP00001008038	96.4286	96.4286
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	95.2381	cricetulus_griseus_chok1gshd	ENSCGRP00001004256	96.4286	95.2381
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	97.619	95.2381	ovis_aries_rambouillet	ENSOARP00020031172	97.619	95.2381
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	97.619	ovis_aries_rambouillet	ENSOARP00020003822	100	97.619
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	97.619	96.4286	ovis_aries_rambouillet	ENSOARP00020021035	90.1099	89.011
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	92.8571	92.8571	sus_scrofa	ENSSSCP00000078376	93.9759	93.9759
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	92.8571	mesocricetus_auratus	ENSMAUP00000002838	96.4286	92.8571
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	microcebus_murinus	ENSMICP00000009421	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	79.7619	78.5714	saimiri_boliviensis_boliviensis	ENSSBOP00000038217	94.3662	92.9577
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	oryctolagus_cuniculus	ENSOCUP00000010135	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	oryctolagus_cuniculus	ENSOCUP00000022396	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	nomascus_leucogenys	ENSNLEP00000032542	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	58.3333	57.1429	felis_catus	ENSFCAP00000053554	94.2308	92.3077
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	89.2857	84.5238	rhinolophus_ferrumequinum	ENSRFEP00010015341	89.2857	84.5238
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	rhinolophus_ferrumequinum	ENSRFEP00010025734	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	rhinolophus_ferrumequinum	ENSRFEP00010025084	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	94.0476	91.6667	jaculus_jaculus	ENSJJAP00000002704	95.1807	92.7711
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	96.4286	rhinopithecus_bieti	ENSRBIP00000011580	100	97.5904
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	90.4762	88.0952	rhinopithecus_bieti	ENSRBIP00000029071	72.381	70.4762
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	sciurus_vulgaris	ENSSVLP00005014474	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	rhinopithecus_roxellana	ENSRROP00000000935	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	92.8571	91.6667	capra_hircus	ENSCHIP00000005956	85.7143	84.6154
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	98.8095	capra_hircus	ENSCHIP00000001753	100	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	97.619	95.2381	capra_hircus	ENSCHIP00000022030	90.1099	87.9121
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	95.2381	90.4762	urocitellus_parryii	ENSUPAP00010005781	95.2381	90.4762
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	monodon_monoceros	ENSMMNP00015001101	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	97.619	microtus_ochrogaster	ENSMOCP00000010124	88.2979	87.234
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	microtus_ochrogaster	ENSMOCP00000002934	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	95.2381	94.0476	phocoena_sinus	ENSPSNP00000025751	95.2381	94.0476
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	96.4286	94.0476	propithecus_coquereli	ENSPCOP00000003515	97.5904	95.1807
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	97.619	97.619	nannospalax_galili	ENSNGAP00000011417	97.619	97.619
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	92.8571	91.6667	nannospalax_galili	ENSNGAP00000007024	85.7143	84.6154
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	vombatus_ursinus	ENSVURP00010021948	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	91.6667	89.2857	moschus_moschiferus	ENSMMSP00000006431	91.6667	89.2857
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	89.2857	84.5238	moschus_moschiferus	ENSMMSP00000006442	81.5217	77.1739
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	moschus_moschiferus	ENSMMSP00000016946	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	98.8095	ictidomys_tridecemlineatus	ENSSTOP00000025336	98.8095	98.8095
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	94.0476	91.6667	ictidomys_tridecemlineatus	ENSSTOP00000026012	95.1807	92.7711
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	89.2857	85.7143	peromyscus_maniculatus_bairdii	ENSPEMP00000028925	84.2697	80.8989
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	cebus_imitator	ENSCCAP00000002224	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	58.3333	53.5714	eptatretus_burgeri	ENSEBUP00000007814	68.0556	62.5
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	xenopus_tropicalis	ENSXETP00000108945	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	chrysemys_picta_bellii	ENSCPBP00000035415	100	100
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	98.8095	96.4286	ciona_savignyi	ENSCSAVP00000008994	98.8095	96.4286
ENSPLOG00000009182	panthera_leo	ENSPLOP00000012495	100	100	gopherus_evgoodei	ENSGEVP00005021584	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression