RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPLOG00000004181	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	409 bases	Strand	Minus strand
Position	B4 : 90781136 - 90781544	RNA binding domain	Ribosomal_S19
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPLOP00000005701	Ribosomal_S19	PF00203	1.9e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPLOT00000006309	324	107aa	ENSPLOP00000005701

Gene Model

Click here to download ENSPLOG00000004181's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPLOG00000004181's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000004181

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPLOG00000004181	panthera_leo	ENSPLOP00000005701	56.0748	37.3832	ursus_americanus	ENSUAMP00000029989	45.4545	30.303
ENSPLOG00000004181	panthera_leo	ENSPLOP00000005701	76.6355	74.7664	panthera_pardus	ENSPPRP00000022934	78.8462	76.9231
ENSPLOG00000004181	panthera_leo	ENSPLOP00000005701	56.0748	37.3832	ursus_maritimus	ENSUMAP00000010228	45.4545	30.303

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression