RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPKIG00000025457	Gene ID	111842397	Accession	-
Symbol	mrpl42	Alias	-	Full Name	mitochondrial ribosomal protein L42
Status	Confidence	Length	5242 bases	Strand	Plus strand
Position	PGUA01000092.1 : 1002989 - 1008230	RNA binding domain	MRP-S32
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPKIP00000010939	MRP-S32	PF10210	1e-34	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
mrpl42-201	ENSPKIT00000035077	2314	146aa	ENSPKIP00000010939

Gene Model

Click here to download ENSPKIG00000025457's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPKIG00000025457's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPKIG00000025457

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	62.3288	46.5753	petromyzon_marinus	ENSPMAP00000008907	58.7097	43.871
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	54.1096	39.0411	eptatretus_burgeri	ENSEBUP00000008669	58.9552	42.5373
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	47.9452	41.7808	lepisosteus_oculatus	ENSLOCP00000018804	55.5556	48.4127
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	66.4384	56.8493	clupea_harengus	ENSCHAP00000023444	65.1007	55.7047
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	62.3288	53.4247	danio_rerio	ENSDARP00000103369	63.1944	54.1667
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	57.5342	51.3699	carassius_auratus	ENSCARP00000121180	64.1221	57.2519
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	58.2192	50.6849	carassius_auratus	ENSCARP00000018875	64.8855	56.4885
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	59.589	42.4658	astyanax_mexicanus	ENSAMXP00000049896	63.5037	45.2555
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	59.589	43.8356	ictalurus_punctatus	ENSIPUP00000022705	59.1837	43.5374
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	70.5479	63.0137	esox_lucius	ENSELUP00000000369	70.5479	63.0137
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	63.0137	47.2603	electrophorus_electricus	ENSEEEP00000016677	63.8889	47.9167
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.863	60.9589	oncorhynchus_kisutch	ENSOKIP00005005582	60	52.3529
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	63.0137	oncorhynchus_kisutch	ENSOKIP00005020946	72.9167	63.8889
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.863	61.6438	oncorhynchus_mykiss	ENSOMYP00000024113	60	52.9412
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	65.0685	56.8493	salmo_salar	ENSSSAP00000027206	70.3704	61.4815
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	65.0685	56.1644	salmo_trutta	ENSSTUP00000095011	70.3704	60.7407
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.2329	62.3288	salmo_trutta	ENSSTUP00000099184	72.2222	63.1944
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	67.1233	60.9589	gadus_morhua	ENSGMOP00000003111	68.0556	61.8056
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.863	58.9041	fundulus_heteroclitus	ENSFHEP00000032296	70.3448	59.3103
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	59.589	52.0548	poecilia_reticulata	ENSPREP00000017834	65.9091	57.5758
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	66.4384	58.9041	oryzias_latipes	ENSORLP00000016925	57.0588	50.5882
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	72.6027	59.589	cyclopterus_lumpus	ENSCLMP00005027382	74.1259	60.8392
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	58.9041	haplochromis_burtoni	ENSHBUP00000014136	72.9167	59.7222
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	73.2877	61.6438	sparus_aurata	ENSSAUP00010012731	73.7931	62.069
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	58.9041	astatotilapia_calliptera	ENSACLP00000039835	72.9167	59.7222
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	60.274	lates_calcarifer	ENSLCAP00010013384	72.4138	60.6897
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	60.9589	45.8904	xenopus_tropicalis	ENSXETP00000062680	60.1351	45.2703
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	58.9041	45.8904	meleagris_gallopavo	ENSMGAP00000011853	65.1515	50.7576
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	57.5342	40.411	ornithorhynchus_anatinus	ENSOANP00000049592	55.6291	39.0728
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	66.4384	53.4247	anolis_carolinensis	ENSACAP00000012350	66.4384	53.4247
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	73.2877	63.0137	cyprinodon_variegatus	ENSCVAP00000001619	73.7931	63.4483
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	67.8082	58.2192	oryzias_melastigma	ENSOMEP00000009500	68.2759	58.6207
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	72.6027	59.589	takifugu_rubripes	ENSTRUP00000056347	73.1034	60
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	70.5479	58.2192	neolamprologus_brichardi	ENSNBRP00000004152	71.5278	59.0278
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	68.4931	58.2192	kryptolebias_marmoratus	ENSKMAP00000018358	69.9301	59.4406
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.863	60.9589	seriola_dumerili	ENSSDUP00000008110	70.3448	61.3793
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	64.3836	45.8904	pygocentrus_nattereri	ENSPNAP00000014798	64.8276	46.2069
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	68.4931	59.589	poecilia_formosa	ENSPFOP00000016595	68.0272	59.1837
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	65.7534	55.4795	scophthalmus_maximus	ENSSMAP00000000403	63.5762	53.6424
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	57.5342	48.6301	cottoperca_gobio	ENSCGOP00000022848	69.4215	58.6777
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.1781	60.274	poecilia_latipinna	ENSPLAP00000000435	69.6552	60.6897
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	72.6027	62.3288	labrus_bergylta	ENSLBEP00000038398	72.1088	61.9048
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	64.3836	55.4795	hucho_hucho	ENSHHUP00000003996	63.5135	54.7297
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	64.3836	56.1644	hucho_hucho	ENSHHUP00000036205	63.5135	55.4054
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	58.2192	50	gasterosteus_aculeatus	ENSGACP00000024868	87.6289	75.2577
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	73.2877	62.3288	anabas_testudineus	ENSATEP00000053347	73.7931	62.7586
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	70.5479	61.6438	oncorhynchus_tshawytscha	ENSOTSP00005102420	60.5882	52.9412
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	65.0685	56.1644	oncorhynchus_tshawytscha	ENSOTSP00005024528	67.8571	58.5714
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	74.6575	62.3288	amphiprion_ocellaris	ENSAOCP00000007777	76.2238	63.6364
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	58.2192	51.3699	sinocyclocheilus_grahami	ENSSGRP00000111496	62.0438	54.7445
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	75.3425	63.0137	acanthochromis_polyacanthus	ENSAPOP00000008560	76.3889	63.8889
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	67.8082	49.3151	salvator_merianae	ENSSMRP00000014221	68.2759	49.6552
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	56.8493	48.6301	nothobranchius_furzeri	ENSNFUP00015009577	63.8462	54.6154
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	67.8082	53.4247	coturnix_japonica	ENSCJPP00005005114	67.8082	53.4247
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	58.9041	maylandia_zebra	ENSMZEP00005011382	70	57.3333
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	60.274	49.3151	oryzias_javanicus	ENSOJAP00000046964	80	65.4545
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.863	56.1644	betta_splendens	ENSBSLP00000026176	62.963	50.6173
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	73.9726	62.3288	amphiprion_percula	ENSAPEP00000027492	75.5245	63.6364
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	68.4931	58.9041	hippocampus_comes	ENSHCOP00000011273	69.4444	59.7222
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.863	60.274	mastacembelus_armatus	ENSMAMP00000014330	73.3813	63.3094
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	67.8082	58.9041	oryzias_sinensis	ENSOSIP00000042406	68.75	59.7222
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	69.1781	53.4247	denticeps_clupeoides	ENSDCDP00000051145	61.2121	47.2727
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	60.9589	sander_lucioperca	ENSSLUP00000026108	72.4138	61.3793
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	61.6438	50.6849	cynoglossus_semilaevis	ENSCSEP00000015657	63.8298	52.4823
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	71.9178	58.9041	pundamilia_nyererei	ENSPNYP00000012619	72.9167	59.7222
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	73.2877	62.3288	myripristis_murdjan	ENSMMDP00005009010	72.7891	61.9048
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	72.6027	60.9589	larimichthys_crocea	ENSLCRP00005058638	73.1034	61.3793
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	63.6986	54.1096	cyprinus_carpio_carpio	ENSCCRP00000075668	62.4161	53.0201
ENSPKIG00000025457	paramormyrops_kingsleyae	ENSPKIP00000010939	70.5479	60.274	seriola_lalandi_dorsalis	ENSSLDP00000012760	71.0345	60.6897

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression