RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPKIG00000005558	Gene ID	111860811	Accession	-
Symbol		Alias	-	Full Name	UAP56-interacting factor-like
Status	Confidence	Length	9100 bases	Strand	Minus strand
Position	PGUA01000042.1 : 432453 - 441552	RNA binding domain	FYTT
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPKIP00000020970	FYTT	PF07078	2.7e-18	1
ENSPKIP00000020970	FYTT	PF07078	2.7e-18	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPKIT00000001595	5447	288aa	ENSPKIP00000020970

Gene Model

Click here to download ENSPKIG00000005558's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPKIG00000005558's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPKIG00000005558

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPKIG00000005558	paramormyrops_kingsleyae	ENSPKIP00000020970	49.3056	38.1944	danio_rerio	ENSDARP00000129968	39.011	30.2198
ENSPKIG00000005558	paramormyrops_kingsleyae	ENSPKIP00000020970	41.3194	29.8611	ictalurus_punctatus	ENSIPUP00000032116	45.5939	32.9502
ENSPKIG00000005558	paramormyrops_kingsleyae	ENSPKIP00000020970	43.0556	32.2917	pygocentrus_nattereri	ENSPNAP00000018012	48.6275	36.4706
ENSPKIG00000005558	paramormyrops_kingsleyae	ENSPKIP00000020970	49.6528	39.2361	cyprinus_carpio_carpio	ENSCCRP00000139370	42.3077	33.432

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression